ID R1F8X9_EMIHU Unreviewed; 1072 AA.
AC R1F8X9;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=PH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=EMIHUDRAFT_233609 {ECO:0000313|EMBL:EOD29709.1};
OS Emiliania huxleyi (Coccolithophore) (Pontosphaera huxleyi).
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Isochrysidales;
OC Noelaerhabdaceae; Emiliania.
OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD29709.1};
RN [1] {ECO:0000313|EMBL:EOD29709.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD29709.1};
RG DOE Joint Genome Institute;
RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., Mayer C.,
RA Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., Brownlee C.,
RA Claverie J.-M., Cock M., De Vargas C., Elias M., Frickenhaus S.,
RA Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., Herman E.,
RA Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., Lin Y.-C.,
RA Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., Marsh M.E., Mock T.,
RA Monier A., Moreau H., Mueller-Roeber B., Napier J., Ogata H., Parker M.,
RA Probert I., Quesneville H., Raines C., Rensing S., Riano-Pachon D.M.,
RA Richier S., Rokitta S., Salamov A., Sarno A.F., Schmutz J., Schroeder D.,
RA Shiraiwa Y., Soanes D.M., Valentin K., Van Der Giezen M., Van Der Peer Y.,
RA Vardi A., Verret F., Von Dassow P., Wheeler G., Williams B., Wilson W.,
RA Wolfe G., Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S.,
RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V.;
RT "Genome variability drives Emilianias global distribution.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000013827}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|Proteomes:UP000013827};
RX PubMed=23760476; DOI=10.1038/nature12221;
RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F.,
RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M.,
RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C.,
RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., de Vargas C.,
RA Verret F., von Dassow P., Valentin K., Van de Peer Y., Wheeler G.,
RA Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., John U., Richards T.,
RA Worden A.Z., Zhang X., Grigoriev I.V., Allen A.E., Bidle K., Borodovsky M.,
RA Bowler C., Brownlee C., Cock J.M., Elias M., Gladyshev V.N., Groth M.,
RA Guda C., Hadaegh A., Iglesias-Rodriguez M.D., Jenkins J., Jones B.M.,
RA Lawson T., Leese F., Lindquist E., Lobanov A., Lomsadze A., Malik S.B.,
RA Marsh M.E., Mackinder L., Mock T., Mueller-Roeber B., Pagarete A.,
RA Parker M., Probert I., Quesneville H., Raines C., Rensing S.A.,
RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M.,
RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G.,
RA Wurch L.L.;
RT "Pan genome of the phytoplankton Emiliania underpins its global
RT distribution.";
RL Nature 499:209-213(2013).
RN [3] {ECO:0000313|EnsemblProtists:EOD29709}
RP IDENTIFICATION.
RG EnsemblProtists;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; KB864779; EOD29709.1; -; Genomic_DNA.
DR RefSeq; XP_005782138.1; XM_005782081.1.
DR STRING; 2903.R1F8X9; -.
DR PaxDb; 2903-EOD29709; -.
DR EnsemblProtists; EOD29709; EOD29709; EMIHUDRAFT_233609.
DR GeneID; 17274982; -.
DR KEGG; ehx:EMIHUDRAFT_233609; -.
DR HOGENOM; CLU_287497_0_0_1; -.
DR Proteomes; UP000013827; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR PANTHER; PTHR47934:SF6; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR PROSITE; PS51375; PPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000013827}.
FT REPEAT 973..1007
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 361..383
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 369..383
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1072 AA; 115530 MW; F12B86246C4A838D CRC64;
MSSTDKLVIP AYKQSSEREF NEWFRNLRTA AKQHKYLLDI IEVGTIRPGA EREAEAVALH
VRYKNIGTAD GLIPAMIDKF FKDLSVTLSR QLYGALQNAV KDDDTLAEML ADEDADHYDD
IKKGIAAIKS LIESEDTNSK NVRTKALRAD LEKAYSPDAL KDLTSASLAK FKTGIEQANK
LLKDSQWHLP DEVIEEYILD AIAAKGATLG ANMRVQIGIQ RQLAAQSGKT YSLKASTLAM
QGILDQDNAD RANEAKAAAQ AAFEAEIASQ GVLKEKLAAA ESQVAALQAQ IKSDKGGGDR
GGRAAAGRKP CPHCNGLHGG KCIGDLICKG VPVAKVLEEL PDRIDHETKV RMAQSSYKKV
CAKSPGRTLP HDPFKKSDST ATDHEEVRAA LADSVTRTFD PDGIVGGFVA GVGTDQVEDT
FPDSNPTDTP AILKAKTAAR NAAEARARGG LWVKFTSFVT ALPRPYIGAS ILLVLLACLI
PVYMGSPASI GTPVADAVDE PSNMGVMVES VTALPLELST GPATGSGGGA EYAIEEDPLQ
PIYRKVAGDM FRAVNDIDVP KTVPLVLSYT CIMLAMYVAR MDAMQAHALV GHVKVVDAYD
TTAGVNMPGS YAAGVDSKAG MNMFPTPDYF PHGWREPEKP IYIRCANNDY LKAKGVGTAY
AFALADPTKP QDTKVVNTEW VNALYAPGLA MPLVSVKECK AQNIVVRFDL CPPRFNYPSG
QTIYFGEDFN IHLMPLGASV GANAAKAIVR GKPGRRPTDG TFWRHALCIS GDALKDLSKI
ADGVPDLSKM DRNEGLDDAA LQANAKYHAR RSTGRPLATR FGGSLGEAWP SLSEITHLTT
NSFFPIREMS LRRLCVRRAA APSLRYAAAG WRAAAPPRRL CSSAASTDLD SAADSLHEPD
EIDAKSVQSP ALARAVRLLL AQESQGVAAD AAGDALMQSV LLNPRLCDAI LRFFEGQKDL
VEASAGRDAD AAVGESYALL IYACVKLRRL DQAFVHFDTM VRRGLEPDPR VFAALLKGCG
RARQLKRGER FFESLLDANA AGARSATAYN ALINMYSHQK QRPATLLPHE EM
//
