ID R1GBL5_BOTPV Unreviewed; 842 AA.
AC R1GBL5;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Putative pre-mrna-splicing factor syf1 protein {ECO:0000313|EMBL:EOD43259.1};
GN ORFNames=UCRNP2_10033 {ECO:0000313|EMBL:EOD43259.1};
OS Botryosphaeria parva (strain UCR-NP2) (Grapevine canker fungus)
OS (Neofusicoccum parvum).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetes incertae sedis; Botryosphaeriales; Botryosphaeriaceae;
OC Neofusicoccum.
OX NCBI_TaxID=1287680 {ECO:0000313|EMBL:EOD43259.1, ECO:0000313|Proteomes:UP000013521};
RN [1] {ECO:0000313|Proteomes:UP000013521}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UCR-NP2 {ECO:0000313|Proteomes:UP000013521};
RX PubMed=23766404; DOI=10.1128/genomea.00339-13;
RA Blanco-Ulate B., Rolshausen P., Cantu D.;
RT "Draft genome sequence of Neofusicoccum parvum isolate UCR-NP2, a fungal
RT vascular pathogen associated with grapevine cankers.";
RL Genome Announc. 1:E0033913-E0033913(2013).
CC -!- FUNCTION: Involved in pre-mRNA splicing and cell cycle progression.
CC {ECO:0000256|ARBA:ARBA00037272}.
CC -!- SUBUNIT: Associated with the spliceosome.
CC {ECO:0000256|ARBA:ARBA00011524}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the crooked-neck family.
CC {ECO:0000256|ARBA:ARBA00008644}.
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DR EMBL; KB916880; EOD43259.1; -; Genomic_DNA.
DR RefSeq; XP_007589264.1; XM_007589202.1.
DR AlphaFoldDB; R1GBL5; -.
DR STRING; 1287680.R1GBL5; -.
DR KEGG; npa:UCRNP2_10033; -.
DR eggNOG; KOG2047; Eukaryota.
DR HOGENOM; CLU_007736_0_0_1; -.
DR OMA; KIWYNYL; -.
DR OrthoDB; 1130725at2759; -.
DR Proteomes; UP000013521; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045075; Syf1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR PANTHER; PTHR11246:SF5; PRE-MRNA-SPLICING FACTOR SYF1; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00386; HAT; 11.
DR SUPFAM; SSF48452; TPR-like; 3.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000013521};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 803..842
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 842 AA; 97268 MW; 91A915F34A9DFB36 CRC64;
MPGAIHPAAA ADAPQPAQVP RAKRTTPTKS SDLYLIGDSD AIYEQELIRN PGSIKPWLDY
AAFKRQNGSL LEQAFVLERA CTTLPRSYKL WKMYLSLRTQ HLQGKNPAKY QAHYVKVNAL
FERALVLLNK MPRIWEMYLE FLMQQPLVTT TRRTFDRALR ALPLTQHNRI WALYRPFANS
ASGETAVKIW RRYIQIHPEH AEDFIALLID MRQYTEAVKK YMDILNNPRF KSREAKGPFQ
FWTEMVELMI DHAKEIETGD DVGIDVEKII RSGIAKFSDQ RGILWVGLAR YWINKGDYER
ARDIFEEGIT TVMTVRDFSI VFDTYAEAEE ALIGIKMEEA GKRQEKGIDD EGLDLDLDIR
MARFEQLMDR RPFLVNDVLL RQNPNNVNEW EKRVGLWGDN KAEVVKTYTD AIATIHPKKA
VGKFHELWTN YAKFYENGGD LQNARIIMEK AVKVPFKSVN ELAEMWCEWA EMELRNENFD
RAVDIMAKAT QAPKRSTIDY FDESLSPQQR VHKSWKLWSF YVDLVESVST LEETKKVYER
IFELKIATPQ TVVNYANLLE ENKYFEDSFK VYERGLDLFS YPVAFELWNL YLTKAVDRKV
GMERLRDLFE QALEECPSKF AKVLYLMYGA LEEERGLARH AMRIYERATR AVADEDRLEM
FEFYITKSAS NFGLTSTRSI YERAIAALPD KEAKEMCLKF AEMERRLGEI DRARAIYGHA
SQFCDPRTEP AFWQKWESFE VQHGNEDTFK EMLRIKRSVQ AQFNTDVNFI ASQALARAQQ
PNGTDGDEQE KVDAMAALER QARAPEGFVA ASSGPEGGNK PTAQAEAPVA ANPDALDIDD
DL
//
