GenomeNet

Database: UniProt
Entry: R1GDC7_BOTPV
LinkDB: R1GDC7_BOTPV
Original site: R1GDC7_BOTPV 
ID   R1GDC7_BOTPV            Unreviewed;       746 AA.
AC   R1GDC7;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   SubName: Full=Putative cleavage and polyadenylation specifity factor protein {ECO:0000313|EMBL:EOD49565.1};
GN   ORFNames=UCRNP2_3642 {ECO:0000313|EMBL:EOD49565.1};
OS   Botryosphaeria parva (strain UCR-NP2) (Grapevine canker fungus)
OS   (Neofusicoccum parvum).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC   Dothideomycetes incertae sedis; Botryosphaeriales; Botryosphaeriaceae;
OC   Neofusicoccum.
OX   NCBI_TaxID=1287680 {ECO:0000313|EMBL:EOD49565.1, ECO:0000313|Proteomes:UP000013521};
RN   [1] {ECO:0000313|Proteomes:UP000013521}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=UCR-NP2 {ECO:0000313|Proteomes:UP000013521};
RX   PubMed=23766404; DOI=10.1128/genomea.00339-13;
RA   Blanco-Ulate B., Rolshausen P., Cantu D.;
RT   "Draft genome sequence of Neofusicoccum parvum isolate UCR-NP2, a fungal
RT   vascular pathogen associated with grapevine cankers.";
RL   Genome Announc. 1:E0033913-E0033913(2013).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the metallo-beta-lactamase superfamily. RNA-
CC       metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily.
CC       {ECO:0000256|ARBA:ARBA00010624}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KB916070; EOD49565.1; -; Genomic_DNA.
DR   RefSeq; XP_007582936.1; XM_007582874.1.
DR   AlphaFoldDB; R1GDC7; -.
DR   STRING; 1287680.R1GDC7; -.
DR   KEGG; npa:UCRNP2_3642; -.
DR   eggNOG; KOG1137; Eukaryota.
DR   HOGENOM; CLU_009673_2_1_1; -.
DR   OMA; CKQHITL; -.
DR   OrthoDB; 169081at2759; -.
DR   Proteomes; UP000013521; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   CDD; cd16292; CPSF3-like_MBL-fold; 1.
DR   Gene3D; 3.40.50.10890; -; 1.
DR   Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR   InterPro; IPR022712; Beta_Casp.
DR   InterPro; IPR021718; CPSF73-100_C.
DR   InterPro; IPR001279; Metallo-B-lactamas.
DR   InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR   PANTHER; PTHR11203; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER; 1.
DR   PANTHER; PTHR11203:SF11; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 3; 1.
DR   Pfam; PF10996; Beta-Casp; 1.
DR   Pfam; PF11718; CPSF73-100_C; 1.
DR   Pfam; PF00753; Lactamase_B; 1.
DR   SMART; SM01027; Beta-Casp; 1.
DR   SMART; SM01098; CPSF73-100_C; 1.
DR   SMART; SM00849; Lactamase_B; 1.
DR   SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
PE   3: Inferred from homology;
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000013521}.
FT   DOMAIN          36..251
FT                   /note="Metallo-beta-lactamase"
FT                   /evidence="ECO:0000259|SMART:SM00849"
FT   DOMAIN          263..407
FT                   /note="Beta-Casp"
FT                   /evidence="ECO:0000259|SMART:SM01027"
FT   DOMAIN          450..702
FT                   /note="Pre-mRNA 3'-end-processing endonuclease
FT                   polyadenylation factor C-term"
FT                   /evidence="ECO:0000259|SMART:SM01098"
FT   REGION          427..450
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          522..543
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          599..620
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          641..667
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        641..665
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   746 AA;  82457 MW;  BC17A1F4E9D87D8E CRC64;
     MAAKRKAAAM SPGSDEPVDP ADELLFYCLG GGNEVGRSSH IIQYKGKTVM LDAGMHPAYD
     GLAALPFYDE FDLSTVDVLL ISHFHIDHAA SLPYVLSKTN FKGRVFMTHP TKAIYKWLIQ
     DSVRVGNISS SSESRIQLYT EADHLSTFPQ IEAIDYYTTH TISSIRITPY PAGHVLGAAM
     FLIEIAGLKI LFTGDYSREE DRHLISAEVP KNVKVDVLIT ESTFGIASHI PRLEREAALM
     KSITSIINRG GRALLPVFAL GRAQELLLIL DEYWAKHPEF QKIPIYYASN IARKCMVVYQ
     TYVYAMNDNI KRLFRERMEE AERNGDASKA GPWDFKYVRS LKSLERFDDV GGCVMLASPG
     MMQNGVSREL LERWAPDQRN GVIMTGYSVE DKKQPVKVFS PANCEELRIP FKADKIAKVV
     GKLAQIPPPM PYRPRQEDGA VEAEDEEEQQ PQLISGVLVQ NDFKMSLMAP EDLREYAGLT
     TTTIVCRQHL TLSAAGIDLI RWALEGTFGA LRQINGKDAA INGKTETNGN GEHKVDEDEA
     DEEIDRSTTS FIVMDCVTIH CHNGGRVEVE WEGNMINDGI ADAVLAVLFT VESSPAAVKQ
     STSKHSHAHA HTPNPHAAAD PRTRFDRLCM FLEAQFGASN TTPIAHPKLP ESASGESTES
     PAADQPAKTV SIAGLPLSEG DDAFSAAEQA ELKRLHALGI PVPGIAIKVD KLVARVWLET
     LDVECPNGVL RDRCEYVVKL VWKSDY
//
DBGET integrated database retrieval system