ID R4G4V5_RHOPR Unreviewed; 519 AA.
AC R4G4V5;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE SubName: Full=Putative u4/u6 small nuclear ribonucleoprotein prp4 {ECO:0000313|EMBL:JAA77084.1, ECO:0000313|EnsemblMetazoa:RPRC008302-PA};
OS Rhodnius prolixus (Triatomid bug).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Paraneoptera; Hemiptera; Heteroptera; Panheteroptera;
OC Cimicomorpha; Reduviidae; Triatominae; Rhodnius.
OX NCBI_TaxID=13249 {ECO:0000313|EMBL:JAA77084.1};
RN [1] {ECO:0000313|EMBL:JAA77084.1}
RP NUCLEOTIDE SEQUENCE.
RA Ribeiro J.M.C., Genta F.A., Sorgine M.H.F., Paiva-Silva G.O.,
RA Majerowicz D., Medeiros M., Koerich L., Terra W.R., Ferreira C.,
RA Pimentel A.C., Bisch P.M., Diniz M.M.P., Nascimento R., Salmon D.,
RA Silber A.M., Alves M., Oliveira M.F., Gondim K.C., Silva Neto M.A.C.,
RA Atella G.C., Araujo H., Dias F.S., Polycarpo C.R., Fampa P., Melo A.C.,
RA Tanaka A.S., Balczun C., Oliveira J.H.M., Goncalves R., Lazoski C.,
RA Pereira M.A., Rivera-Pomar R., Diambra L., Schaub G.A., Garcia E.S.,
RA Azambuja P., Braz G.R.C., Oliveira P.L.;
RT "An insight into the transcriptome of the digestive tract of the blood
RT sucking bug, Rhodnius prolixus.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000015103}
RP NUCLEOTIDE SEQUENCE.
RA Wilson R.K., Warren W., Dotson E., Oliveira P.L.;
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblMetazoa:RPRC008302-PA}
RP IDENTIFICATION.
RG EnsemblMetazoa;
RL Submitted (MAY-2015) to UniProtKB.
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DR EMBL; ACPB03006429; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; GAHY01000426; JAA77084.1; -; mRNA.
DR STRING; 13249.R4G4V5; -.
DR EnsemblMetazoa; RPRC008302-RA; RPRC008302-PA; RPRC008302.
DR VEuPathDB; VectorBase:RPRC008302; -.
DR eggNOG; KOG0272; Eukaryota.
DR HOGENOM; CLU_000288_57_20_1; -.
DR OMA; LNEPICY; -.
DR OrthoDB; 5476798at2759; -.
DR Proteomes; UP000015103; Unassembled WGS sequence.
DR GO; GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 4.10.280.110; Pre-mRNA processing factor 4 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR014906; PRP4-like.
DR InterPro; IPR036285; PRP4-like_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19846; WD40 REPEAT PROTEIN; 1.
DR PANTHER; PTHR19846:SF0; WD_REPEATS_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08799; PRP4; 1.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00500; SFM; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF158230; PRP4-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000015103};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000313|EMBL:JAA77084.1};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 98..150
FT /note="Pre-mRNA processing factor 4 (PRP4)-like"
FT /evidence="ECO:0000259|SMART:SM00500"
FT REPEAT 263..310
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 319..353
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 354..395
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 396..437
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 438..480
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 481..512
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 519 AA; 58425 MW; 150E49A5C28478F1 CRC64;
MSDDEDLLYI KKQKTIHYGS LEEQEKERLN ALVSTVAAAA AGEENAVEDA DKLGKNELGN
LHVSDEYMEL EEEMSKDKQA LLDEFERRKK ARQVNVSTDD NEVRQNLRQL GEPICLFGEG
PLERRSRLRD LLARLGEDAI QKKQEEEEER LKQEKEQETW YHEGSETLRE ARLWIARYSL
PRARARLKKA REELTQPEAS VTARRQELQK KLTSLTIYSS QIGDTRPVSY CCFSPDSTML
ATSSWSGLCK IWSVPDCNEK KVLRGHNCNV CSIVFHPNAG EEGTVCALAS SAVDGTVKLW
SLNSDEPVAD VEGHSPHRVS RLGFHPSGRL LATCCYDYSW RLWDLESAQE VLHQEGHSNA
VYCVSFQGDG SIAATGGLDA FGRVWDLRTG RCIMFMEGHL KSVFGIDFSP DGYHLATASG
DNSCKVWDLR QQSCVYTIPA HSNLLSHVKY QPGTGDFILT ASYDNTAKVW SNKTWQPLKT
LSGHDGKVMC LDVTPDSKYI VTASYDRTFK LWAPEEVPA
//