GenomeNet

Database: UniProt
Entry: R4G4V5_RHOPR
LinkDB: R4G4V5_RHOPR
Original site: R4G4V5_RHOPR 
ID   R4G4V5_RHOPR            Unreviewed;       519 AA.
AC   R4G4V5;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 60.
DE   SubName: Full=Putative u4/u6 small nuclear ribonucleoprotein prp4 {ECO:0000313|EMBL:JAA77084.1, ECO:0000313|EnsemblMetazoa:RPRC008302-PA};
OS   Rhodnius prolixus (Triatomid bug).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Paraneoptera; Hemiptera; Heteroptera; Panheteroptera;
OC   Cimicomorpha; Reduviidae; Triatominae; Rhodnius.
OX   NCBI_TaxID=13249 {ECO:0000313|EMBL:JAA77084.1};
RN   [1] {ECO:0000313|EMBL:JAA77084.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Ribeiro J.M.C., Genta F.A., Sorgine M.H.F., Paiva-Silva G.O.,
RA   Majerowicz D., Medeiros M., Koerich L., Terra W.R., Ferreira C.,
RA   Pimentel A.C., Bisch P.M., Diniz M.M.P., Nascimento R., Salmon D.,
RA   Silber A.M., Alves M., Oliveira M.F., Gondim K.C., Silva Neto M.A.C.,
RA   Atella G.C., Araujo H., Dias F.S., Polycarpo C.R., Fampa P., Melo A.C.,
RA   Tanaka A.S., Balczun C., Oliveira J.H.M., Goncalves R., Lazoski C.,
RA   Pereira M.A., Rivera-Pomar R., Diambra L., Schaub G.A., Garcia E.S.,
RA   Azambuja P., Braz G.R.C., Oliveira P.L.;
RT   "An insight into the transcriptome of the digestive tract of the blood
RT   sucking bug, Rhodnius prolixus.";
RL   Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000015103}
RP   NUCLEOTIDE SEQUENCE.
RA   Wilson R.K., Warren W., Dotson E., Oliveira P.L.;
RL   Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblMetazoa:RPRC008302-PA}
RP   IDENTIFICATION.
RG   EnsemblMetazoa;
RL   Submitted (MAY-2015) to UniProtKB.
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DR   EMBL; ACPB03006429; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; GAHY01000426; JAA77084.1; -; mRNA.
DR   STRING; 13249.R4G4V5; -.
DR   EnsemblMetazoa; RPRC008302-RA; RPRC008302-PA; RPRC008302.
DR   VEuPathDB; VectorBase:RPRC008302; -.
DR   eggNOG; KOG0272; Eukaryota.
DR   HOGENOM; CLU_000288_57_20_1; -.
DR   OMA; LNEPICY; -.
DR   OrthoDB; 5476798at2759; -.
DR   Proteomes; UP000015103; Unassembled WGS sequence.
DR   GO; GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 4.10.280.110; Pre-mRNA processing factor 4 domain; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR014906; PRP4-like.
DR   InterPro; IPR036285; PRP4-like_sf.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19846; WD40 REPEAT PROTEIN; 1.
DR   PANTHER; PTHR19846:SF0; WD_REPEATS_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF08799; PRP4; 1.
DR   Pfam; PF00400; WD40; 7.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00500; SFM; 1.
DR   SMART; SM00320; WD40; 7.
DR   SUPFAM; SSF158230; PRP4-like; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 2.
DR   PROSITE; PS50082; WD_REPEATS_2; 6.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 4.
PE   2: Evidence at transcript level;
KW   Reference proteome {ECO:0000313|Proteomes:UP000015103};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Ribonucleoprotein {ECO:0000313|EMBL:JAA77084.1};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   DOMAIN          98..150
FT                   /note="Pre-mRNA processing factor 4 (PRP4)-like"
FT                   /evidence="ECO:0000259|SMART:SM00500"
FT   REPEAT          263..310
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          319..353
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          354..395
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          396..437
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          438..480
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          481..512
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ   SEQUENCE   519 AA;  58425 MW;  150E49A5C28478F1 CRC64;
     MSDDEDLLYI KKQKTIHYGS LEEQEKERLN ALVSTVAAAA AGEENAVEDA DKLGKNELGN
     LHVSDEYMEL EEEMSKDKQA LLDEFERRKK ARQVNVSTDD NEVRQNLRQL GEPICLFGEG
     PLERRSRLRD LLARLGEDAI QKKQEEEEER LKQEKEQETW YHEGSETLRE ARLWIARYSL
     PRARARLKKA REELTQPEAS VTARRQELQK KLTSLTIYSS QIGDTRPVSY CCFSPDSTML
     ATSSWSGLCK IWSVPDCNEK KVLRGHNCNV CSIVFHPNAG EEGTVCALAS SAVDGTVKLW
     SLNSDEPVAD VEGHSPHRVS RLGFHPSGRL LATCCYDYSW RLWDLESAQE VLHQEGHSNA
     VYCVSFQGDG SIAATGGLDA FGRVWDLRTG RCIMFMEGHL KSVFGIDFSP DGYHLATASG
     DNSCKVWDLR QQSCVYTIPA HSNLLSHVKY QPGTGDFILT ASYDNTAKVW SNKTWQPLKT
     LSGHDGKVMC LDVTPDSKYI VTASYDRTFK LWAPEEVPA
//
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