ID R4JYI6_CLOPA Unreviewed; 651 AA.
AC R4JYI6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE SubName: Full=Heparinase II/III-like protein {ECO:0000313|EMBL:AGK95892.1};
GN ORFNames=Clopa_0870 {ECO:0000313|EMBL:AGK95892.1};
OS Clostridium pasteurianum BC1.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=86416 {ECO:0000313|EMBL:AGK95892.1, ECO:0000313|Proteomes:UP000013523};
RN [1] {ECO:0000313|EMBL:AGK95892.1, ECO:0000313|Proteomes:UP000013523}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BC1 {ECO:0000313|EMBL:AGK95892.1,
RC ECO:0000313|Proteomes:UP000013523};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Dunn J.,
RA Taghavi S., Francis A., van der Lelie D., Woyke T.;
RT "Complete sequence of chromosome of Clostridium pasteurianum BC1.";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003261; AGK95892.1; -; Genomic_DNA.
DR RefSeq; WP_015614216.1; NC_021182.1.
DR AlphaFoldDB; R4JYI6; -.
DR STRING; 86416.Clopa_0870; -.
DR KEGG; cpas:Clopa_0870; -.
DR PATRIC; fig|86416.3.peg.862; -.
DR eggNOG; ENOG502ZAN1; Bacteria.
DR HOGENOM; CLU_008982_0_0_9; -.
DR OrthoDB; 9772435at2; -.
DR Proteomes; UP000013523; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016829; F:lyase activity; IEA:InterPro.
DR Gene3D; 2.70.98.70; -; 1.
DR Gene3D; 1.50.10.100; Chondroitin AC/alginate lyase; 1.
DR InterPro; IPR008929; Chondroitin_lyas.
DR InterPro; IPR012480; Hepar_II_III.
DR InterPro; IPR032518; HepII_N.
DR PANTHER; PTHR38045; CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE; 1.
DR PANTHER; PTHR38045:SF1; CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE; 1.
DR Pfam; PF16332; DUF4962; 1.
DR Pfam; PF07940; Hepar_II_III; 1.
DR SUPFAM; SSF48230; Chondroitin AC/alginate lyase; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000013523};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 50..328
FT /note="Heparinase II N-terminal"
FT /evidence="ECO:0000259|Pfam:PF16332"
SQ SEQUENCE 651 AA; 73515 MW; 7AA4D1E171514636 CRC64;
MKSIYKKFFL ITMVVIIILY SISNLILYSS KKVSNPEIYK ADSQHIIKLL KQNNKNNQHP
RLMATSKDFQ NIKLEIIIDK AMKERFNYLE KQADAILKQE PVKYEFSDGL SFLSTSRKVL
NRIQTLAFVY QVSGQKKYAD RAWLELETIS NDKKFPDWHP GQFLDTAEMT NAAAIGYDWL
YNYLSANQRA VIRNAILNKG LKPAIEFYSK ENSIIKGDNN WNSVCNGGIG MGALAIGDEG
GEFESTSGQI LQNAVKYLPI MLNKYAPDGA WYEGPTYWDY GTTYLAYFIS ALDSSLGTDY
NLSKAPGFSS TGDFPIYMAG PGGMFNFSDS SSNKIKSPVL LWLSNKFKNG EYAWYYNKIT
NIKNTTAMTF IWGNKKVNEK SIKIQDKYFR QSEVVTLHSS ITKSTDSFIG FKAGTNGLSH
SNLDIGTFVY DALGVRWFCD LGADNYNLQG YFNGALNGQR WQYYRERAEG QNTLVINPSS
KPDQNVYAKT KIETFKSDSR KSFAIADITD AYKPNAISVK RGVALYKNTG TMLIQDEIIA
NKSSDIWWFA HTQAKIEISE DKKSAILSKN GKRILVSILS PSDGYFSKMK AEPLPSSPNP
INQAHNNMEK LTIHLTDVDD TTISVVISPL VNDKNLHSPN LVRLQDWNTD N
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