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Database: UniProt
Entry: R4WY32_9BURK
LinkDB: R4WY32_9BURK
Original site: R4WY32_9BURK 
ID   R4WY32_9BURK            Unreviewed;       270 AA.
AC   R4WY32;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 52.
DE   RecName: Full=Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215};
DE            EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};
DE   AltName: Full=OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215};
DE            Short=OMPDCase {ECO:0000256|HAMAP-Rule:MF_01215};
DE            Short=OMPdecase {ECO:0000256|HAMAP-Rule:MF_01215};
GN   Name=pyrF {ECO:0000256|HAMAP-Rule:MF_01215};
GN   ORFNames=BRPE64_ACDS23470 {ECO:0000313|EMBL:BAN24101.1};
OS   Caballeronia insecticola.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Caballeronia.
OX   NCBI_TaxID=758793 {ECO:0000313|EMBL:BAN24101.1, ECO:0000313|Proteomes:UP000013966};
RN   [1] {ECO:0000313|Proteomes:UP000013966}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23833137; DOI=10.1128/genomeA.00441-13;
RA   Shibata T.F., Maeda T., Nikoh N., Yamaguchi K., Oshima K., Hattori M.,
RA   Nishiyama T., Hasebe M., Fukatsu T., Kikuchi Y., Shigenobu S.;
RT   "Complete Genome Sequence of Burkholderia sp. Strain RPE64, Bacterial
RT   Symbiont of the Bean Bug Riptortus pedestris.";
RL   Genome Announc. 1:340-344(2013).
RN   [2] {ECO:0000313|EMBL:BAN24101.1, ECO:0000313|Proteomes:UP000013966}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RPE64 {ECO:0000313|EMBL:BAN24101.1};
RX   PubMed=29863457; DOI=10.1099/ijsem.0.002848;
RA   Takeshita K., Tamaki H., Ohbayashi T., Meng X.-Y., Sone T., Mitani Y.,
RA   Peeters C., Kikuchi Y., Vandamme P.;
RT   "Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean
RT   bug Riptortus pedestris.";
RL   Int. J. Syst. Evol. Microbiol. 68:2370-2374(2018).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=H(+) + orotidine 5'-phosphate = CO2 + UMP;
CC         Xref=Rhea:RHEA:11596, ChEBI:CHEBI:15378, ChEBI:CHEBI:16526,
CC         ChEBI:CHEBI:57538, ChEBI:CHEBI:57865; EC=4.1.1.23;
CC         Evidence={ECO:0000256|ARBA:ARBA00001419, ECO:0000256|HAMAP-
CC         Rule:MF_01215};
CC   -!- PATHWAY: Pyrimidine metabolism; UMP biosynthesis via de novo pathway;
CC       UMP from orotate: step 2/2. {ECO:0000256|ARBA:ARBA00004861,
CC       ECO:0000256|HAMAP-Rule:MF_01215}.
CC   -!- SIMILARITY: Belongs to the OMP decarboxylase family. Type 2 subfamily.
CC       {ECO:0000256|ARBA:ARBA00008847, ECO:0000256|HAMAP-Rule:MF_01215}.
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DR   EMBL; AP013058; BAN24101.1; -; Genomic_DNA.
DR   RefSeq; WP_016346249.1; NC_021287.1.
DR   AlphaFoldDB; R4WY32; -.
DR   STRING; 758793.BRPE64_ACDS23470; -.
DR   KEGG; buo:BRPE64_ACDS23470; -.
DR   PATRIC; fig|758793.3.peg.2351; -.
DR   HOGENOM; CLU_060704_1_0_4; -.
DR   OrthoDB; 9808470at2; -.
DR   UniPathway; UPA00070; UER00120.
DR   Proteomes; UP000013966; Chromosome 1.
DR   GO; GO:0004590; F:orotidine-5'-phosphate decarboxylase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006207; P:'de novo' pyrimidine nucleobase biosynthetic process; IEA:InterPro.
DR   GO; GO:0044205; P:'de novo' UMP biosynthetic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd04725; OMP_decarboxylase_like; 1.
DR   Gene3D; 3.20.20.70; Aldolase class I; 1.
DR   HAMAP; MF_01215; OMPdecase_type2; 1.
DR   InterPro; IPR013785; Aldolase_TIM.
DR   InterPro; IPR018089; OMPdecase_AS.
DR   InterPro; IPR011995; OMPdecase_type-2.
DR   InterPro; IPR001754; OMPdeCOase_dom.
DR   InterPro; IPR011060; RibuloseP-bd_barrel.
DR   NCBIfam; TIGR02127; pyrF_sub2; 1.
DR   PANTHER; PTHR43375; OROTIDINE 5'-PHOSPHATE DECARBOXYLASE; 1.
DR   PANTHER; PTHR43375:SF1; OROTIDINE 5'-PHOSPHATE DECARBOXYLASE; 1.
DR   Pfam; PF00215; OMPdecase; 1.
DR   SMART; SM00934; OMPdecase; 1.
DR   SUPFAM; SSF51366; Ribulose-phoshate binding barrel; 1.
DR   PROSITE; PS00156; OMPDECASE; 1.
PE   3: Inferred from homology;
KW   Decarboxylase {ECO:0000256|ARBA:ARBA00022793, ECO:0000256|HAMAP-
KW   Rule:MF_01215};
KW   Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000256|HAMAP-Rule:MF_01215};
KW   Pyrimidine biosynthesis {ECO:0000256|ARBA:ARBA00022975, ECO:0000256|HAMAP-
KW   Rule:MF_01215}.
FT   DOMAIN          17..255
FT                   /note="Orotidine 5'-phosphate decarboxylase"
FT                   /evidence="ECO:0000259|SMART:SM00934"
FT   ACT_SITE        95
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01215"
SQ   SEQUENCE   270 AA;  28845 MW;  E18F3DE9FE993103 CRC64;
     MSFIQTLNAG WSRTQSLLCV GLDPEPSKFP GALNGRADAI FEFCKTIVDA TAPYASSFKP
     QIAYFAAHRA EDQLEALIAH IHETYPGLPV ILDAKRGDIG STAEQYAKEA FERYQADAVT
     VNPYMGFDSI EPYLAHEGRG VIVLCRTSNP GGSDLQFLTT DGKPLYQVVA QLAAQKWNAS
     GQLGLVVGAT FPKEIETVRG IVGDMPLLIP GIGAQGGDVE ATVRAGRTAN GAGMLINSSR
     AIIYAGKDDD YAQAAAAAAQ KTRDSINQYR
//
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