ID R4X4M9_9BURK Unreviewed; 62 AA.
AC R4X4M9;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:BAN27442.1};
GN ORFNames=BRPE64_DCDS05060 {ECO:0000313|EMBL:BAN27442.1};
OS Caballeronia insecticola.
OG Plasmid p1 {ECO:0000313|EMBL:BAN27442.1,
OG ECO:0000313|Proteomes:UP000013966}.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Caballeronia.
OX NCBI_TaxID=758793 {ECO:0000313|EMBL:BAN27442.1, ECO:0000313|Proteomes:UP000013966};
RN [1] {ECO:0000313|Proteomes:UP000013966}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC PLASMID=p1 {ECO:0000313|Proteomes:UP000013966};
RX PubMed=23833137; DOI=10.1128/genomeA.00441-13;
RA Shibata T.F., Maeda T., Nikoh N., Yamaguchi K., Oshima K., Hattori M.,
RA Nishiyama T., Hasebe M., Fukatsu T., Kikuchi Y., Shigenobu S.;
RT "Complete Genome Sequence of Burkholderia sp. Strain RPE64, Bacterial
RT Symbiont of the Bean Bug Riptortus pedestris.";
RL Genome Announc. 1:340-344(2013).
RN [2] {ECO:0000313|EMBL:BAN27442.1, ECO:0000313|Proteomes:UP000013966}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RPE64 {ECO:0000313|EMBL:BAN27442.1};
RC PLASMID=p1 {ECO:0000313|EMBL:BAN27442.1,
RC ECO:0000313|Proteomes:UP000013966};
RX PubMed=29863457; DOI=10.1099/ijsem.0.002848;
RA Takeshita K., Tamaki H., Ohbayashi T., Meng X.-Y., Sone T., Mitani Y.,
RA Peeters C., Kikuchi Y., Vandamme P.;
RT "Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean
RT bug Riptortus pedestris.";
RL Int. J. Syst. Evol. Microbiol. 68:2370-2374(2018).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
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DR EMBL; AP013061; BAN27442.1; -; Genomic_DNA.
DR AlphaFoldDB; R4X4M9; -.
DR KEGG; buo:BRPE64_DCDS05060; -.
DR PATRIC; fig|758793.3.peg.5652; -.
DR HOGENOM; CLU_117621_0_3_4; -.
DR Proteomes; UP000013966; Plasmid p1.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF60; LD37574P; 1.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000313|EMBL:BAN27442.1};
KW Plasmid {ECO:0000313|EMBL:BAN27442.1}.
FT DOMAIN 1..61
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
SQ SEQUENCE 62 AA; 6921 MW; 074AF4E623B8A987 CRC64;
MKWFNDAKGF GFITPDDGGE DLFAHFSEIQ SKGFKSLQEN QKVSFEVKQG PKGKQASTIQ
PL
//
