ID R5AEJ1_9FIRM Unreviewed; 712 AA.
AC R5AEJ1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Tex-like protein-like protein {ECO:0000313|EMBL:CCX39417.1};
GN ORFNames=BN453_00365 {ECO:0000313|EMBL:CCX39417.1};
OS Firmicutes bacterium CAG:102.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1262998 {ECO:0000313|EMBL:CCX39417.1, ECO:0000313|Proteomes:UP000018112};
RN [1] {ECO:0000313|EMBL:CCX39417.1, ECO:0000313|Proteomes:UP000018112}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:102 {ECO:0000313|EMBL:CCX39417.1,
RC ECO:0000313|Proteomes:UP000018112};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX39417.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CAWG010000031; CCX39417.1; -; Genomic_DNA.
DR AlphaFoldDB; R5AEJ1; -.
DR STRING; 1262998.BN453_00365; -.
DR Proteomes; UP000018112; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018112}.
FT DOMAIN 641..710
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 712 AA; 78670 MW; F6D2ADD834FA939B CRC64;
MDIIRKLREE FGITQSQAEN TVRLLDEGNT VPFIARYRKE MTGSLDDQII RQLSERLTAL
RNLEDRRTQV RTAIAEQGRL TDALAAKLDA AQTQTEIEDI YRPFRPKRRT RASIAKEKGL
QPLADIIWGQ KLIGTPEEAA KAFVDSGQGV DTVLDAINGA MDILAEQFSD DADLRKLLRE
ETIKCGAIVS KKTKDEPSVY EMYYDYREPL KKAAGHRVLA MNRGEKEGFL SVKIEGEEEK
LLQRMERRLI RRSSDTADIL RGVIADSYKR LIAPSLEREI RNDLTEKAEE AAIGVFRENL
RQLLLQPPIS GKVVLALDPA YRTGCKIAVI DTTGKPLETT VVYPTPPQNK TAEAEKKLLA
LIEKYGVDLI SIGNGTASRE SELFVAEMLK KTSRRVQYII ANEAGASVYS ASKLGAEEFP
DYDVSLRSAV SIGRRIQDPL AELVKIDPKS IGVGQYQHDM NQKRLGEALG GVVEDCVNSV
GVDLNTASPA LLSYVAGIHA TVAKNILKYR EEHGKFTARR ELLKVAKLGP KAYEQCAGFL
RLPESEMPLD RTGVHPESYA AAEGLLALCG YGLADVAAKR VGGLAKKIKS PEKTAAELGI
GVPTLEDIMR ELEKPGRDPR EDAPAPVLRS DVLSMEDLQE GMVLTGTVRN VIDFGVFVDI
GVHQDGLVHI SQICDRFIKH PLEAVKLGDV VQVKVLSVDL QKKRIALTMK GI
//
