ID R5B5Y1_9CLOT Unreviewed; 363 AA.
AC R5B5Y1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Possible RNA polymerase sigma factor {ECO:0000313|EMBL:CCX49589.1};
GN ORFNames=BN545_01029 {ECO:0000313|EMBL:CCX49589.1};
OS Clostridium sp. CAG:226.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262781 {ECO:0000313|EMBL:CCX49589.1, ECO:0000313|Proteomes:UP000018047};
RN [1] {ECO:0000313|EMBL:CCX49589.1, ECO:0000313|Proteomes:UP000018047}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:226 {ECO:0000313|Proteomes:UP000018047};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX49589.1}.
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DR EMBL; CAWN010000034; CCX49589.1; -; Genomic_DNA.
DR AlphaFoldDB; R5B5Y1; -.
DR Proteomes; UP000018047; Unassembled WGS sequence.
DR GO; GO:0016787; F:hydrolase activity; IEA:InterPro.
DR Gene3D; 1.10.10.2520; Cell wall hydrolase SleB, domain 1; 1.
DR Gene3D; 2.30.30.40; SH3 Domains; 1.
DR InterPro; IPR011105; Cell_wall_hydrolase_SleB.
DR InterPro; IPR003646; SH3-like_bac-type.
DR InterPro; IPR036028; SH3-like_dom_sf.
DR InterPro; IPR042047; SleB_dom1.
DR PANTHER; PTHR34408; FAMILY PROTEIN, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR34408:SF1; GLYCOSYL HYDROLASE FAMILY 19 DOMAIN-CONTAINING PROTEIN HI_1415; 1.
DR Pfam; PF07486; Hydrolase_2; 1.
DR Pfam; PF08239; SH3_3; 1.
DR SMART; SM00287; SH3b; 1.
DR SUPFAM; SSF50044; SH3-domain; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
DR PROSITE; PS51781; SH3B; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018047};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..363
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5038761601"
FT DOMAIN 126..188
FT /note="SH3b"
FT /evidence="ECO:0000259|PROSITE:PS51781"
FT REGION 42..118
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 191..234
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 49..65
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..96
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 191..213
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 214..234
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 363 AA; 38729 MW; 55A746D99392C697 CRC64;
MIRHAAGIFI LVAILAFAGC MAVSQTGNFS ADVQMIDTME IPDDTAAPGT PTPTVQPSAA
PTYTPAFTAE PTDEPTPAPT VEPTAEPTPA PAVEPTAEAT PEPTKSPEPT KTPTPTPKYE
VTDLEKKAAY LNAGSANFRK GPGLDYKIID ELKENAVFTV VGKSGDWLKV KYDGTYGFIL
AEFVEYGAPP TPTPKPTAKP TATPKPTKTP SPTVEPTKQP ENTGGSESNS GVSSNDYFSS
GGGFSADELL LVAQVVQEES KGSGVEARAA VANVIYNRIA SSRFPDSVSG VIFQKNQFTV
ARDEDKLRAV VPVSKTIEAV NQIFVNGDRF MPEDVLYFRS SSKGTSWNKR VYYATFGGNS
FFY
//
