ID R5CJ17_9BACT Unreviewed; 499 AA.
AC R5CJ17;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=Transcription regulator araC/xylS {ECO:0000313|EMBL:CCX67935.1};
GN ORFNames=BN567_01871 {ECO:0000313|EMBL:CCX67935.1};
OS Prevotella sp. CAG:255.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=1262923 {ECO:0000313|EMBL:CCX67935.1, ECO:0000313|Proteomes:UP000017913};
RN [1] {ECO:0000313|EMBL:CCX67935.1, ECO:0000313|Proteomes:UP000017913}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:255 {ECO:0000313|Proteomes:UP000017913};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX67935.1}.
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DR EMBL; CAWV010000005; CCX67935.1; -; Genomic_DNA.
DR AlphaFoldDB; R5CJ17; -.
DR Proteomes; UP000017913; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF6; RCS-SPECIFIC HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RCLR; 1.
DR Pfam; PF12833; HTH_18; 1.
DR Pfam; PF13374; TPR_10; 1.
DR Pfam; PF13176; TPR_7; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius}; Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..499
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004377034"
FT TRANSMEM 299..321
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 384..493
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 499 AA; 55700 MW; A17A1B17BD66F4AD CRC64;
MNIIAVIAAA LLLIIPCSGS LAAGNSRAAE IAETAQKDYY SGEYFDALEG FITGLKVARD
EKDSLSLMIC TGYISNIYNC FNDYSSSLAY LLEGYEVARM CNNENMNARF LSNIVSTCCR
LGDVKSAEKY YALEEKVAMN DRDENDYYLL YNKARIMQAG GRFNEALQMH HRLLDMAKRR
GMAELYSLIQ YSEIGNVLVR LGRYSEARKY GEMCMSLSGR LSDDDLKINA YNIMAGACKG
LGQADQYALY HSKALALTDS VFNPKRFYMV RNRLDVYRDS VAGERITMLN GIVTRQSDAM
LLLILLVVVM FAVSGAVWYA YRRQAKTKGA LPEKAVASDC DMLPGDCMPV ESVLLTVEAA
APVQLSETDS AVEEQCLMSR EQAEALYEKI EQAFNDVAVI SEPEFSLGTL SQLVGSNMKY
VSWVINSFYG KNFKTILNEC RVREACIRLG DTERYGNITI QGIYESLGYR SASSFNRAFR
QVTGMSPSAF LKQAQVEKV
//
