ID R5DRP1_9FIRM Unreviewed; 481 AA.
AC R5DRP1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|Pfam:PF13443};
GN ORFNames=BN462_00727 {ECO:0000313|EMBL:CCX82853.1};
OS Ruminococcus sp. CAG:108.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Ruminococcus.
OX NCBI_TaxID=1262950 {ECO:0000313|EMBL:CCX82853.1, ECO:0000313|Proteomes:UP000018037};
RN [1] {ECO:0000313|EMBL:CCX82853.1, ECO:0000313|Proteomes:UP000018037}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:108 {ECO:0000313|Proteomes:UP000018037};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX82853.1}.
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DR EMBL; CAXD010000060; CCX82853.1; -; Genomic_DNA.
DR AlphaFoldDB; R5DRP1; -.
DR Proteomes; UP000018037; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF13443; HTH_26; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018037}.
FT DOMAIN 17..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|Pfam:PF13443"
SQ SEQUENCE 481 AA; 55915 MW; 709C7491DC143C99 CRC64;
MIMSFCEKFQ RAVGDTTIYR LSKITGIERT KLQRIKSGQK LPTMEELELI CASLCLSPEE
KFNLTKEYEI AIIGEDRYKS RICTANFIEN LYNIFEVKHC PIERSFKISL NMEYPAVIKG
ESDTYNAIET IMRQEAVENN TIYMYGDIFE DKSPINNLLK SITDIAGLSV CHIFGLKPYD
DSYDNYYSNI NMINKIYPIF LSKTDYRAYY YYDKTTNSSI LPYFIVTDNC LVTISYDKRS
AVITQDKNII KLHKELFEQK INNSYALIAD INTLMGYSSI YVEHLRHYDI ANTNLITIEY
EPCVTPYIGD ELIEMCMRKD IPNFPVIFDR AKSCLSQYRN FMLKTSIFTE RGLDNFLMTG
RITEIPEIAY NPIPPKYRIK ILNELCKSAI NLKQSSLHLI REDKLHLPKN LRYCGTGQIN
DFFLLLSDEK NSHSVFKLNE CGFAKPFYDF ATSLVDSEIV YSNEETIKII QNKISEFSQS
L
//