ID R5EVI6_9GAMM Unreviewed; 166 AA.
AC R5EVI6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN Name=rimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN ORFNames=BN779_01032 {ECO:0000313|EMBL:CCX92592.1};
OS Succinatimonas sp. CAG:777.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Aeromonadales;
OC Succinivibrionaceae; Succinatimonas.
OX NCBI_TaxID=1262974 {ECO:0000313|EMBL:CCX92592.1, ECO:0000313|Proteomes:UP000018241};
RN [1] {ECO:0000313|EMBL:CCX92592.1, ECO:0000313|Proteomes:UP000018241}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:777 {ECO:0000313|Proteomes:UP000018241};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SIMILARITY: Belongs to the RimP family. {ECO:0000256|HAMAP-
CC Rule:MF_01077}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX92592.1}.
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DR EMBL; CAXH010000084; CCX92592.1; -; Genomic_DNA.
DR AlphaFoldDB; R5EVI6; -.
DR STRING; 1262974.BN779_01032; -.
DR Proteomes; UP000018241; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR CDD; cd01734; YlxS_C; 1.
DR Gene3D; 2.30.30.180; Ribosome maturation factor RimP, C-terminal domain; 1.
DR Gene3D; 3.30.300.70; RimP-like superfamily, N-terminal; 1.
DR HAMAP; MF_01077; RimP; 1.
DR InterPro; IPR003728; Ribosome_maturation_RimP.
DR InterPro; IPR028998; RimP_C.
DR InterPro; IPR036847; RimP_C_sf.
DR InterPro; IPR028989; RimP_N.
DR InterPro; IPR035956; RimP_N_sf.
DR PANTHER; PTHR33867; RIBOSOME MATURATION FACTOR RIMP; 1.
DR PANTHER; PTHR33867:SF1; RIBOSOME MATURATION FACTOR RIMP; 1.
DR Pfam; PF17384; DUF150_C; 1.
DR Pfam; PF02576; RimP_N; 1.
DR SUPFAM; SSF74942; YhbC-like, C-terminal domain; 1.
DR SUPFAM; SSF75420; YhbC-like, N-terminal domain; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_01077};
KW Reference proteome {ECO:0000313|Proteomes:UP000018241};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_01077}.
FT DOMAIN 12..84
FT /note="Ribosome maturation factor RimP N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02576"
FT DOMAIN 87..154
FT /note="Ribosome maturation factor RimP C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17384"
SQ SEQUENCE 166 AA; 17946 MW; 3DD73C3564486898 CRC64;
MAGTIEEKVA ELVTPLVESM DLTVWGIRFR GGNDHAMLQV FVDSEQGVSA DKCGELMDVL
SPALDAADLI APKYTLEVSS PGLDRILFTL EQVKAYTGKT VKAELRIPTQ GRHKLQGTLD
EVTDDGMLKI NDKISGLIEV AFSNVSTARV VPEFPTNNKK APKSGS
//