ID R5FFL0_9BACT Unreviewed; 528 AA.
AC R5FFL0;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Ribonuclease G {ECO:0000313|EMBL:CCY02424.1};
GN ORFNames=BN812_01937 {ECO:0000313|EMBL:CCY02424.1};
OS Prevotella sp. CAG:924.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=1262938 {ECO:0000313|EMBL:CCY02424.1, ECO:0000313|Proteomes:UP000018357};
RN [1] {ECO:0000313|EMBL:CCY02424.1, ECO:0000313|Proteomes:UP000018357}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:924 {ECO:0000313|Proteomes:UP000018357};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY02424.1}.
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DR EMBL; CAXK010000107; CCY02424.1; -; Genomic_DNA.
DR AlphaFoldDB; R5FFL0; -.
DR STRING; 1262938.BN812_01937; -.
DR Proteomes; UP000018357; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000018357};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 41..145
FT /note="S1 motif"
FT /evidence="ECO:0000259|SMART:SM00316"
SQ SEQUENCE 528 AA; 60593 MW; 4E9DD2F4CEDC5500 CRC64;
MKRNMTSEVV IDVKPKEISI ALLEDKRLVE YQTEMRSENF SVGNIYIAKV KKLMPGLNAC
FVDVGYERDA FLHFLDLGNQ FNSYAKYLKQ VQSDRKKLMP FDKASRLPDL KKDSSIQQTL
TVGQEVLVQI VKEPISTKGP RLTCELSFAG RYLVLIPFGD KVNVSSKIKS AEERARLKQL
IHSIKPKNCG IIVRTVAEGK RVAELDAELK ILYKRWMDAI MKVQKTQHRP QLVYEETRRA
VAMLRDLFNP SYENIYVNDE EVFEQVKSYV GLIAPDKVSI VKQYTGKVPI FDNFNVTKQI
KSSFGKTVNY AHGAYLIIEH TEAMHVVDVN SGNRSKNEKG QEGTALETNL GAADELARQL
RLRDMGGIIV VDFIDMKLAE DRQMLYERMC KNMQKDRARH NILPLSKFGL MQITRQRVRP
AMDVNVEEAC PTCNGTGKIK SSILFTDMLE GKIDKLVNKI GVKKFYLHVH PYVAAYINQG
FMSMKRQWQL KYGFGVRVIA SQKLAFLQYE FYDTKGQFID MKEEIETK
//
