ID R5IVC4_9FIRM Unreviewed; 150 AA.
AC R5IVC4;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 28-FEB-2018, entry version 16.
DE SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY46238.1};
GN ORFNames=BN793_00553 {ECO:0000313|EMBL:CCY46238.1};
OS Firmicutes bacterium CAG:822.
OC Bacteria; Firmicutes; environmental samples.
OX NCBI_TaxID=1263032 {ECO:0000313|EMBL:CCY46238.1, ECO:0000313|Proteomes:UP000017964};
RN [1] {ECO:0000313|EMBL:CCY46238.1, ECO:0000313|Proteomes:UP000017964}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:822 {ECO:0000313|Proteomes:UP000017964};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J.,
RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E.,
RA Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J.,
RA Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F.,
RA Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S.,
RA Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F.,
RA Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E.,
RA Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T.,
RA MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J.,
RA Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units
RT of genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an
CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC preliminary data. {ECO:0000313|EMBL:CCY46238.1}.
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DR EMBL; CAYG010000031; CCY46238.1; -; Genomic_DNA.
DR Proteomes; UP000017964; Unassembled WGS sequence.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 2.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF12844; HTH_19; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 2.
DR SUPFAM; SSF47413; SSF47413; 2.
DR PROSITE; PS50943; HTH_CROC1; 2.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000017964};
KW DNA-binding {ECO:0000313|EMBL:CCY46238.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000017964}.
FT DOMAIN 8 62 HTH cro/C1-type. {ECO:0000259|PROSITE:
FT PS50943}.
FT DOMAIN 85 139 HTH cro/C1-type. {ECO:0000259|PROSITE:
FT PS50943}.
SQ SEQUENCE 150 AA; 17778 MW; 3CDF3D0AAE35D5F8 CRC64;
MAIFFKRVHD LRVDNDLKQK EIATMLKVNI NTYPHWESGM YEMPIEMIDK LSKFYNCSID
YLTGLSNEHG TFSKKFNCEE MFIRLKRLRK ENHLSQAEIG NKLGFGQMNW CRYETGKILI
PFSKLYLIAK EFNVSLDYLM GKSEENKMPK
//
