ID R5JBD3_9FIRM Unreviewed; 204 AA.
AC R5JBD3;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=R3H domain protein {ECO:0000313|EMBL:CCY46127.1};
GN ORFNames=BN793_00447 {ECO:0000313|EMBL:CCY46127.1};
OS Firmicutes bacterium CAG:822.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263032 {ECO:0000313|EMBL:CCY46127.1, ECO:0000313|Proteomes:UP000017964};
RN [1] {ECO:0000313|EMBL:CCY46127.1, ECO:0000313|Proteomes:UP000017964}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:822 {ECO:0000313|Proteomes:UP000017964};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY46127.1}.
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DR EMBL; CAYG010000020; CCY46127.1; -; Genomic_DNA.
DR AlphaFoldDB; R5JBD3; -.
DR STRING; 1263032.BN793_00447; -.
DR Proteomes; UP000017964; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
DR CDD; cd02414; KH-II_Jag; 1.
DR CDD; cd02644; R3H_jag; 1.
DR Gene3D; 3.30.300.20; -; 1.
DR Gene3D; 3.30.1370.50; R3H-like domain; 1.
DR InterPro; IPR038008; Jag_KH.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR004044; KH_dom_type_2.
DR InterPro; IPR009019; KH_sf_prok-type.
DR InterPro; IPR039247; KhpB.
DR InterPro; IPR001374; R3H_dom.
DR InterPro; IPR036867; R3H_dom_sf.
DR InterPro; IPR034079; R3H_KhpB.
DR NCBIfam; NF041568; Jag_EloR; 1.
DR PANTHER; PTHR35800; PROTEIN JAG; 1.
DR PANTHER; PTHR35800:SF1; RNA-BINDING PROTEIN KHPB; 1.
DR Pfam; PF13083; KhpA-B_KH; 1.
DR Pfam; PF01424; R3H; 1.
DR SMART; SM00393; R3H; 1.
DR SUPFAM; SSF54814; Prokaryotic type KH domain (KH-domain type II); 1.
DR SUPFAM; SSF82708; R3H domain; 1.
DR PROSITE; PS50823; KH_TYPE_2; 1.
DR PROSITE; PS51061; R3H; 1.
PE 4: Predicted;
KW Cell shape {ECO:0000256|ARBA:ARBA00022960};
KW Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW Reference proteome {ECO:0000313|Proteomes:UP000017964};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00118}.
FT DOMAIN 61..136
FT /note="KH type-2"
FT /evidence="ECO:0000259|PROSITE:PS50823"
FT DOMAIN 137..203
FT /note="R3H"
FT /evidence="ECO:0000259|PROSITE:PS51061"
SQ SEQUENCE 204 AA; 23180 MW; BADDAF6BA0ACF11E CRC64;
MLEVVKNESK NKEEALNKCL EQLNVNSNEV YSYIEEGEAG LFGKKKYAAY VVTKYDVKEY
VKDFLNNLAN NMNTSFNVEV NEKDGVISAI IVADDSGVMI GKEGKTLNAI QTILRQSLRK
YGNFDIKVNL DISGYKAKRE KNIEREVKKI AKEVLKTKIE AKLDPMNSYE RRIVHTIIAE
YDGLATQSEG EAPNRYVVIK IKED
//
