ID R5JD39_9FIRM Unreviewed; 411 AA.
AC R5JD39;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Transposase IS605 OrfB family central region {ECO:0000313|EMBL:CCY46911.1};
GN ORFNames=BN793_01173 {ECO:0000313|EMBL:CCY46911.1};
OS Firmicutes bacterium CAG:822.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263032 {ECO:0000313|EMBL:CCY46911.1, ECO:0000313|Proteomes:UP000017964};
RN [1] {ECO:0000313|EMBL:CCY46911.1, ECO:0000313|Proteomes:UP000017964}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:822 {ECO:0000313|Proteomes:UP000017964};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY46911.1}.
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DR EMBL; CAYG010000055; CCY46911.1; -; Genomic_DNA.
DR AlphaFoldDB; R5JD39; -.
DR STRING; 1263032.BN793_01173; -.
DR Proteomes; UP000017964; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000017964};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 33..74
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 206..315
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 329..396
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 411 AA; 48045 MW; 7D2564D4A95C3587 CRC64;
MQKVKVCKKL FTRTSVCDIV NAKMIEGDDV KILKGYVFRM YPNKKQEELI NKTIGCCRFI
YNYFLDDKIK EYKIAGKSKS AYEQIKLIPS LSKEYPFLKE VDSCALRNSL FNLEDAYKRF
YDGSGYPRFK VKGVHESYKT NNIKNSYKGN NYNSIKLDLK NTTITLPKLK EVKIRGYRNK
EVILGEVKSA VIKKDAGRYY VSVLIEEELI KPAFVPTSII GLDLGIKDLI VTSFNEKIEN
NIKINTKRMI GLQRGLARCK KGSKNRYKMK LKIQRLYQKI RNARKHMIHG ITNKLINEND
IIVTEDLDVK SMQKNHYVAK GLNENPISEI IRVLKYKANW NNKKLIQIHR YYPSSQICSV
CDYKNKEIKD LSIRKWECPV CHTEHERDYN AAVNIMFKGL EKYMLYLEQG I
//
