ID R5JGF9_9BACE Unreviewed; 1160 AA.
AC R5JGF9;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCY48056.1};
GN ORFNames=BN523_01339 {ECO:0000313|EMBL:CCY48056.1};
OS Bacteroides sp. CAG:189.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=1262737 {ECO:0000313|EMBL:CCY48056.1, ECO:0000313|Proteomes:UP000018406};
RN [1] {ECO:0000313|EMBL:CCY48056.1, ECO:0000313|Proteomes:UP000018406}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:189 {ECO:0000313|Proteomes:UP000018406};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY48056.1}.
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DR EMBL; CAYI010000032; CCY48056.1; -; Genomic_DNA.
DR AlphaFoldDB; R5JGF9; -.
DR Proteomes; UP000018406; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 3.55.50.30; -; 1.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR008969; CarboxyPept-like_regulatory.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR011662; Secretin/TonB_short_N.
DR InterPro; IPR023996; TonB-dep_OMP_SusC/RagA.
DR InterPro; IPR023997; TonB-dep_OMP_SusC/RagA_CS.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR NCBIfam; TIGR04056; OMP_RagA_SusC; 1.
DR NCBIfam; TIGR04057; SusC_RagA_signa; 1.
DR PANTHER; PTHR47322; SUSC HOMOLOG-RELATED; 1.
DR PANTHER; PTHR47322:SF22; TONB-DEPENDENT RECEPTOR SUSC; 1.
DR Pfam; PF13715; CarbopepD_reg_2; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF07660; STN; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SMART; SM00965; STN; 1.
DR SUPFAM; SSF49464; Carboxypeptidase regulatory domain-like; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Reference proteome {ECO:0000313|Proteomes:UP000018406};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..1160
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004383120"
FT DOMAIN 47..98
FT /note="Secretin/TonB short N-terminal"
FT /evidence="ECO:0000259|SMART:SM00965"
SQ SEQUENCE 1160 AA; 130462 MW; 3D814F76CDD2006A CRC64;
MMKRKLRLFT LLLFCWCTFI QAQNVSLNLK NVTVKEALEA VRKQTGKSFF FNVNDVNMNQ
RITLNFKNEP LEKAVKLILE GQKLSYEIKD NHIILSKAQV VKQVGNDLDV SGKVVDNAGD
PLIGVNVAVD GVGVTITDID GIYRVKVPVG HTLTFTYIGY KPQTVKVKEK QNINIRMTED
SKALEEVVVI GYGTQKKVNL TGAIGYTDSK AIENRPVANL GQAIQGAIPN LNISFGSGKP
GETTSMNIRG FASINQESKP LILIDGIEGS IDNLNPRDVE SISVLKDASS AAIYGARAPF
GVVLVTTKKG KAGKMQVNYN GRFSFSTETT KTDFITSGYD AAKLVDGFMR SYNGNSYTRY
TEDDYKELEA RRYDKTENPE RPWTVVQNRD GVDKYMYYAN FDWYNYLIKS SRPTWDNNVS
ISGGTDKINY LVSGNFNTQT GIYAQNPDKY KTGNLRARLN AEVKSWLSLN FATSFFSSKY
SAPGLGHGNN LPNYTFHAMP FLMPYNPDGT HVFSNPIIGQ QPTDGVHIMT ADGNSKSVED
KKQMTYTVGA TFKIYKGLSF NANYSFKYNT VDYMERTAKS QFSQYPGVLE DADGSLFKNK
LRQLNEKVYY HSADAYFNYE QSFGGHNLRA VAGFNYEQNA YKRIYATKLN IQSDNLNDFN
LGDISKDVTL EGGQNEWALL GYFGRLGYDW KGKYLAEFNV RWDASSRFPK GQRSGTFPSF
SAGWRASEEK FFEPIRNVVS NLKIRGSIGS LGNQAVTDCY PYLQTLTMAY YDGYLLDGDR
LTYASVTPPP AGDQTWETII HKNVGIDLGF FNNRLTYSAD VFIRDTRDML IAGKALPGVY
GTTSPKENAA DLRTKGFEMT LSWNDSFTLL DKPFSYNVSL SLADSRSHIT KYDNPLKEFS
KSNYYVGMEI GEIWGYHVTG LFGTDEEAKA YQEAIDHSYV CKNILETAIG ENKGLKAGDM
IFADLDGSGR IDDGKKTADD RGDMRIIGNS RPRYTYSGNL GFNWYGFDCS AFFQGVGRQN
RYPGGNAMLF WGGFARPYAS FTPIDWVDNI WTEENPDAYF PRMRGYAAQG DRSLAKVNDR
YLQNLAYCRL KNLTLGYTLP VQWTTKVGME RVRFYFSGDN LLTWTKLKTK YIDPEQFSAD
ADARVYPYAK TFSFGLDVTF
//
