ID R5JKF8_9BACE Unreviewed; 340 AA.
AC R5JKF8;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=HTH lacI-type domain-containing protein {ECO:0000259|PROSITE:PS50932};
GN ORFNames=BN464_00137 {ECO:0000313|EMBL:CCY54825.1};
OS Bacteroides eggerthii CAG:109.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=1263043 {ECO:0000313|EMBL:CCY54825.1, ECO:0000313|Proteomes:UP000018152};
RN [1] {ECO:0000313|EMBL:CCY54825.1, ECO:0000313|Proteomes:UP000018152}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:109 {ECO:0000313|Proteomes:UP000018152};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY54825.1}.
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DR EMBL; CAYK010000002; CCY54825.1; -; Genomic_DNA.
DR AlphaFoldDB; R5JKF8; -.
DR Proteomes; UP000018152; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06307; PBP1_sugar_binding; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR30146:SF145; LACI-FAMILY TRANSCRIPTION REGULATOR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..47
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 340 AA; 38980 MW; B38EA7EBC5778F96 CRC64;
MAGVSAGTVD RVLHNRGDVS RTSREKVQKV LDEIDYHPNM FAIGLAAKKR YHIICIIPYY
IEHDYWSSVA QGIERAAQEL RPFNVGIDYV FYNHADKTSY EKACALLQAE PVDAVLIAPN
FQYETLRLTS YLESKKVPYA FIDFNMEQTH ALCYIGQDSK ISGYIAAKIL MNRYQEGQEI
VLFLNNQKNS PAEVQMQRRL EGFMQYFAAE HKDLIIHDVV LHKENTASNE ELLDTFFAEH
PKAALGAVFN SRVYQVADYL QKKGHRLDAL VGYDLLQKNV EHLKSGEVNY LIGQRPGLQG
YCGVKALCNH IVFKKPVTAV KYMPIDILMK ENIDFYFEFE
//
