ID R5KPB5_9CLOT Unreviewed; 341 AA.
AC R5KPB5;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Integrase family protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BN753_02015 {ECO:0000313|EMBL:CCY68635.1};
OS Clostridium sp. CAG:678.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262831 {ECO:0000313|EMBL:CCY68635.1, ECO:0000313|Proteomes:UP000017959};
RN [1] {ECO:0000313|EMBL:CCY68635.1, ECO:0000313|Proteomes:UP000017959}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:678 {ECO:0000313|Proteomes:UP000017959};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY68635.1}.
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DR EMBL; CAYP010000074; CCY68635.1; -; Genomic_DNA.
DR AlphaFoldDB; R5KPB5; -.
DR STRING; 1262831.BN753_02015; -.
DR Proteomes; UP000017959; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd00397; DNA_BRE_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 4: Predicted;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000017959}.
FT DOMAIN 21..108
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 134..325
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 341 AA; 39632 MW; 67A000D59A668D0D CRC64;
MSRKTQMNNI TNPELISQIN PQNKQLLEDF VDYLRSVQRR ETTINGYIND IQIAFVWNLL
YNGNIFYCDW TKRQIVRYQN WLLNENKNSP ARIKRLKSSL SSLGNYIETV LDDEYPNFRN
IINKIESPVN QPVRDKTILS DDQIKTLLDS LIEKGKYDKA CVLALALYSG RRKSELLRFR
VSDFAKDKLV CGGALYKSDP IETKGSGVSG KQLECFCLAK QFQPYLDLWM KYRNDHKIES
NWLFPDKHDP SLHMQISTLN SWAKSFSRIL GVSFYWHAMR HMTVTNFKRA GIPDTVIQQY
MGWSDISMVP VYSDLGAEEQ LGMYFSDDGI VKPESKELSE I
//