ID R5NJK1_9FIRM Unreviewed; 417 AA.
AC R5NJK1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCZ04345.1};
GN ORFNames=BN730_00104 {ECO:0000313|EMBL:CCZ04345.1};
OS Eubacterium sp. CAG:603.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae;
OC Eubacterium.
OX NCBI_TaxID=1262891 {ECO:0000313|EMBL:CCZ04345.1, ECO:0000313|Proteomes:UP000018312};
RN [1] {ECO:0000313|EMBL:CCZ04345.1, ECO:0000313|Proteomes:UP000018312}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:603 {ECO:0000313|Proteomes:UP000018312};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCZ04345.1}.
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DR EMBL; CAZI010000060; CCZ04345.1; -; Genomic_DNA.
DR AlphaFoldDB; R5NJK1; -.
DR Proteomes; UP000018312; Unassembled WGS sequence.
DR GO; GO:0016830; F:carbon-carbon lyase activity; IEA:UniProt.
DR Gene3D; 3.20.20.10; Alanine racemase; 1.
DR InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR InterPro; IPR022643; De-COase2_C.
DR InterPro; IPR022644; De-COase2_N.
DR InterPro; IPR029066; PLP-binding_barrel.
DR PANTHER; PTHR43727; DIAMINOPIMELATE DECARBOXYLASE; 1.
DR PANTHER; PTHR43727:SF2; DIAMINOPIMELATE DECARBOXYLASE 1, CHLOROPLASTIC-RELATED; 1.
DR Pfam; PF02784; Orn_Arg_deC_N; 1.
DR Pfam; PF00278; Orn_DAP_Arg_deC; 1.
DR SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR SUPFAM; SSF51419; PLP-binding barrel; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018312}.
FT DOMAIN 40..260
FT /note="Orn/DAP/Arg decarboxylase 2 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02784"
FT DOMAIN 261..375
FT /note="Orn/DAP/Arg decarboxylase 2 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF00278"
SQ SEQUENCE 417 AA; 47986 MW; 4323478F277C035F CRC64;
MNIDELENIA ANCKAPMYIF DSDIVTDTVE MFRRNLNTAS KADINLCYAM KANPFLVSIM
NELTDRIEVC SMGEFRICRN KEITPEKLLI SGVMKDRQDI YEILDCYGER CLYTAESLMQ
YSYFKEWCKA NKKPVNVYLR LTSGNQFGMD KQTIRNIIMD QTNENYRPNI SGIHYFSGTQ
KKSMKKIRDE LTSLQEFICE LEDTTGYHID ELEYGPGIPA AYFEGQDNAL EQHIKEVADV
INEIQPDYKI TLEMGRAFAA GCGYYMTEVK DIKHSDDKNY CIVNGGMHQL NYDGQIRGMY
MPHIRHIRSA SVEYNETDFE KSDTNKLEHN ELMNTESVNN WTICGELCTG NDVLVQKIAI
DDLKAGDRFV FENTGAYSMT EGMALFLSHV LPAIAIYNKK DGIKIIRKEM ETYKLNM
//