ID   R5PNX2_9BACT            Unreviewed;       404 AA.
AC   R5PNX2;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 30.
DE   RecName: Full=Site-specific integrase {ECO:0008006|Google:ProtNLM};
GN   ORFNames=BN783_01766 {ECO:0000313|EMBL:CCZ10642.1};
OS   Odoribacter sp. CAG:788.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Odoribacteraceae;
OC   Odoribacter.
OX   NCBI_TaxID=1262909 {ECO:0000313|EMBL:CCZ10642.1, ECO:0000313|Proteomes:UP000018100};
RN   [1] {ECO:0000313|EMBL:CCZ10642.1, ECO:0000313|Proteomes:UP000018100}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MGS:788 {ECO:0000313|Proteomes:UP000018100};
RA   Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA   Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA   Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA   Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA   Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA   Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA   Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA   Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA   Wang J., Brunak S., Ehrlich S.D.;
RT   "Dependencies among metagenomic species, viruses, plasmids and units of
RT   genetic variation.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CCZ10642.1}.
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DR   EMBL; CAZK010000118; CCZ10642.1; -; Genomic_DNA.
DR   AlphaFoldDB; R5PNX2; -.
DR   Proteomes; UP000018100; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   CDD; cd01185; INTN1_C_like; 1.
DR   Gene3D; 1.10.150.130; -; 1.
DR   Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR   InterPro; IPR035386; Arm-DNA-bind_5.
DR   InterPro; IPR044068; CB.
DR   InterPro; IPR011010; DNA_brk_join_enz.
DR   InterPro; IPR013762; Integrase-like_cat_sf.
DR   InterPro; IPR002104; Integrase_catalytic.
DR   InterPro; IPR010998; Integrase_recombinase_N.
DR   InterPro; IPR025269; SAM-like_dom.
DR   Pfam; PF17293; Arm-DNA-bind_5; 1.
DR   Pfam; PF13102; Phage_int_SAM_5; 1.
DR   Pfam; PF00589; Phage_integrase; 1.
DR   SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR   PROSITE; PS51900; CB; 1.
DR   PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE   4: Predicted;
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000018100}.
FT   DOMAIN          109..192
FT                   /note="Core-binding (CB)"
FT                   /evidence="ECO:0000259|PROSITE:PS51900"
FT   DOMAIN          214..398
FT                   /note="Tyr recombinase"
FT                   /evidence="ECO:0000259|PROSITE:PS51898"
SQ   SEQUENCE   404 AA;  47334 MW;  C9806335E2620267 CRC64;
     MATLKVMIDK QKMTREGVCP IVIKILHNKG RRVIQLPQRI MFEQWDLKRS MINEKFGTPE
     QRREWQRINY SIECEIMKLK KIILDCEASG INYSVEDIFE AYYHKTSRVP VFDYIREIIT
     SLERVGKNGN SNVYKGTLGI LRRFCGKENL TFEEVNYSFL RNFEAHLQER GCKINTISFY
     LRTIRSVFNR AIKDGIVSED HYPFKKITIR KEKTIKRAIY KDEIAQIKNL DLSSMPHLEM
     ARDIFLFSFY MRGMSFKDIA FLRVANIVGD RIYYSRQKTG QKLNIKLTDR AMEIIRKYNN
     LTDRKAFIFP IILFPGKNEF SQYKNSYRKI NRRLKTVGSI LGSRVPLTTY VARHSWASIA
     KRSGIPISVI SEGLGHDSEK TTQIYLDSFE NNVLDAANEM VTDI
//