ID R5TIJ5_9FIRM Unreviewed; 155 AA.
AC R5TIJ5;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN Name=rimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN ORFNames=BN683_02465 {ECO:0000313|EMBL:CCZ65480.1};
OS Roseburia sp. CAG:50.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Roseburia.
OX NCBI_TaxID=1262949 {ECO:0000313|EMBL:CCZ65480.1, ECO:0000313|Proteomes:UP000018378};
RN [1] {ECO:0000313|EMBL:CCZ65480.1, ECO:0000313|Proteomes:UP000018378}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:50 {ECO:0000313|Proteomes:UP000018378};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SIMILARITY: Belongs to the RimP family. {ECO:0000256|HAMAP-
CC Rule:MF_01077}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCZ65480.1}.
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DR EMBL; CBAK010000206; CCZ65480.1; -; Genomic_DNA.
DR AlphaFoldDB; R5TIJ5; -.
DR Proteomes; UP000018378; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR CDD; cd01734; YlxS_C; 1.
DR Gene3D; 2.30.30.180; Ribosome maturation factor RimP, C-terminal domain; 1.
DR Gene3D; 3.30.300.70; RimP-like superfamily, N-terminal; 1.
DR HAMAP; MF_01077; RimP; 1.
DR InterPro; IPR003728; Ribosome_maturation_RimP.
DR InterPro; IPR028998; RimP_C.
DR InterPro; IPR036847; RimP_C_sf.
DR InterPro; IPR028989; RimP_N.
DR InterPro; IPR035956; RimP_N_sf.
DR PANTHER; PTHR33867; RIBOSOME MATURATION FACTOR RIMP; 1.
DR PANTHER; PTHR33867:SF1; RIBOSOME MATURATION FACTOR RIMP; 1.
DR Pfam; PF17384; DUF150_C; 1.
DR Pfam; PF02576; RimP_N; 1.
DR SUPFAM; SSF74942; YhbC-like, C-terminal domain; 1.
DR SUPFAM; SSF75420; YhbC-like, N-terminal domain; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_01077};
KW Reference proteome {ECO:0000313|Proteomes:UP000018378};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_01077}.
FT DOMAIN 16..85
FT /note="Ribosome maturation factor RimP N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02576"
FT DOMAIN 89..155
FT /note="Ribosome maturation factor RimP C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17384"
SQ SEQUENCE 155 AA; 18182 MW; AF5FA318C1C81C06 CRC64;
MSKREEYEAR TEALLLPIME EMHFELVDVE YVKEGSTWYL RAYIDKEGGI TVNDCEAVAR
RMNDLLDEED FISDSYVFEV SSPGLGRPLK KEKDYVRSMG KELEIRTYRA INRQKEFYGV
LTAYTDDTVT ICTEEDEELT FQKNEIALIR LAFDF
//
