GenomeNet

Database: UniProt
Entry: R5VSD1_9FIRM
LinkDB: R5VSD1_9FIRM
Original site: R5VSD1_9FIRM 
ID   R5VSD1_9FIRM            Unreviewed;       153 AA.
AC   R5VSD1;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 40.
DE   RecName: Full=Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173};
GN   Name=argR {ECO:0000256|HAMAP-Rule:MF_00173};
GN   ORFNames=BN566_01211 {ECO:0000313|EMBL:CCZ83437.1};
OS   Ruminococcus sp. CAG:254.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC   Ruminococcus.
OX   NCBI_TaxID=1262953 {ECO:0000313|EMBL:CCZ83437.1, ECO:0000313|Proteomes:UP000018181};
RN   [1] {ECO:0000313|EMBL:CCZ83437.1, ECO:0000313|Proteomes:UP000018181}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MGS:254 {ECO:0000313|Proteomes:UP000018181};
RA   Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA   Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA   Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA   Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA   Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA   Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA   Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA   Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA   Wang J., Brunak S., Ehrlich S.D.;
RT   "Dependencies among metagenomic species, viruses, plasmids and units of
RT   genetic variation.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Regulates arginine biosynthesis genes. {ECO:0000256|HAMAP-
CC       Rule:MF_00173}.
CC   -!- PATHWAY: Amino-acid biosynthesis; L-arginine biosynthesis [regulation].
CC       {ECO:0000256|HAMAP-Rule:MF_00173}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496,
CC       ECO:0000256|HAMAP-Rule:MF_00173}.
CC   -!- SIMILARITY: Belongs to the ArgR family. {ECO:0000256|ARBA:ARBA00008316,
CC       ECO:0000256|HAMAP-Rule:MF_00173}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CCZ83437.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CBAR010000105; CCZ83437.1; -; Genomic_DNA.
DR   AlphaFoldDB; R5VSD1; -.
DR   STRING; 1262953.BN566_01211; -.
DR   UniPathway; UPA00068; -.
DR   Proteomes; UP000018181; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0034618; F:arginine binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006526; P:arginine biosynthetic process; IEA:UniProtKB-UniPathway.
DR   GO; GO:0051259; P:protein complex oligomerization; IEA:InterPro.
DR   Gene3D; 3.30.1360.40; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   HAMAP; MF_00173; Arg_repressor; 1.
DR   InterPro; IPR001669; Arg_repress.
DR   InterPro; IPR020899; Arg_repress_C.
DR   InterPro; IPR036251; Arg_repress_C_sf.
DR   InterPro; IPR020900; Arg_repress_DNA-bd.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   NCBIfam; TIGR01529; argR_whole; 1.
DR   PANTHER; PTHR34471; ARGININE REPRESSOR; 1.
DR   PANTHER; PTHR34471:SF1; ARGININE REPRESSOR; 1.
DR   Pfam; PF01316; Arg_repressor; 1.
DR   Pfam; PF02863; Arg_repressor_C; 1.
DR   PRINTS; PR01467; ARGREPRESSOR.
DR   SUPFAM; SSF55252; C-terminal domain of arginine repressor; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE   3: Inferred from homology;
KW   Amino-acid biosynthesis {ECO:0000256|HAMAP-Rule:MF_00173};
KW   Arginine biosynthesis {ECO:0000256|HAMAP-Rule:MF_00173};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00173};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|HAMAP-
KW   Rule:MF_00173}; Reference proteome {ECO:0000313|Proteomes:UP000018181};
KW   Repressor {ECO:0000256|HAMAP-Rule:MF_00173};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW   Rule:MF_00173};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW   Rule:MF_00173}.
FT   DOMAIN          1..69
FT                   /note="Arginine repressor DNA-binding"
FT                   /evidence="ECO:0000259|Pfam:PF01316"
FT   DOMAIN          75..138
FT                   /note="Arginine repressor C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02863"
SQ   SEQUENCE   153 AA;  17179 MW;  54AAD9285AFA031E CRC64;
     MGKKERHAAI MELIQQKELE TQEDLIQALL EQGISVTQAT ISRDIRELQL VKQHLENGVC
     CYRLPEQTPI SDHLLRDAIL RTDYAGQIAV LHCRSGTAQA ICAAVDAKQD HRIVGTIAGD
     DTIFILLRSE EQAAFFAKQY AVWMQTEEGE TIC
//
DBGET integrated database retrieval system