ID   R5W7Q1_9BACT            Unreviewed;       299 AA.
AC   R5W7Q1;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   27-MAR-2024, entry version 41.
DE   RecName: Full=HTH lysR-type domain-containing protein {ECO:0000259|PROSITE:PS50931};
GN   ORFNames=BN505_00550 {ECO:0000313|EMBL:CCZ99288.1};
OS   Alistipes sp. CAG:157.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae;
OC   Alistipes.
OX   NCBI_TaxID=1262692 {ECO:0000313|EMBL:CCZ99288.1, ECO:0000313|Proteomes:UP000018346};
RN   [1] {ECO:0000313|EMBL:CCZ99288.1, ECO:0000313|Proteomes:UP000018346}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MGS:157 {ECO:0000313|Proteomes:UP000018346};
RA   Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA   Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA   Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA   Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA   Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA   Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA   Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA   Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA   Wang J., Brunak S., Ehrlich S.D.;
RT   "Dependencies among metagenomic species, viruses, plasmids and units of
RT   genetic variation.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CCZ99288.1}.
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DR   EMBL; CBAZ010000138; CCZ99288.1; -; Genomic_DNA.
DR   AlphaFoldDB; R5W7Q1; -.
DR   Proteomes; UP000018346; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08411; PBP2_OxyR; 1.
DR   Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30419; HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD; 1.
DR   PANTHER; PTHR30419:SF31; LYSR FAMILY TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000018346}.
FT   DOMAIN          1..58
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   299 AA;  32958 MW;  11438FCB0712DF50 CRC64;
     MTIVQLEYLL AVVNFGSFSL AAERSFVTQP SLSMQIKNLE EELGVVLLDR SKKPVILTQA
     GEVVAERARD VVKMFNSVYE DVAVLKGTVS GVLRLGVIPT VAPYLLPRMV QDFAGRCPDV
     HLEIKEMITP QIVRAMEHDE IDAAILAGGT CPEGITEDCI FDDRFYAYLS PGHRLFERSN
     IRLEDLDLKE MLLLSEGHCF RDQILDLCPS KGGAHASYYF ESGSLETLMR IVDNTEFMTI
     IPEMAVPYVP QEHAAQVKPL AKGAVSRKIA VAVRRTYVKD SIVKVLKESV AAVGGAAGE
//