ID R5YR86_9FIRM Unreviewed; 484 AA.
AC R5YR86;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Site-specific recombinase {ECO:0000313|EMBL:CDA29305.1};
GN ORFNames=BN504_00840 {ECO:0000313|EMBL:CDA29305.1};
OS Eubacterium sp. CAG:156.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae;
OC Eubacterium.
OX NCBI_TaxID=1262880 {ECO:0000313|EMBL:CDA29305.1, ECO:0000313|Proteomes:UP000018124};
RN [1] {ECO:0000313|EMBL:CDA29305.1, ECO:0000313|Proteomes:UP000018124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:156 {ECO:0000313|Proteomes:UP000018124};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA29305.1}.
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DR EMBL; CBBN010000082; CDA29305.1; -; Genomic_DNA.
DR AlphaFoldDB; R5YR86; -.
DR STRING; 1262880.BN504_00840; -.
DR Proteomes; UP000018124; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000150; F:DNA strand exchange activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR CDD; cd00338; Ser_Recombinase; 1.
DR Gene3D; 3.40.50.1390; Resolvase, N-terminal catalytic domain; 1.
DR InterPro; IPR038109; DNA_bind_recomb_sf.
DR InterPro; IPR011109; DNA_bind_recombinase_dom.
DR InterPro; IPR006118; Recombinase_CS.
DR InterPro; IPR006119; Resolv_N.
DR InterPro; IPR036162; Resolvase-like_N_sf.
DR InterPro; IPR025827; Zn_ribbon_recom_dom.
DR PANTHER; PTHR30461; DNA-INVERTASE FROM LAMBDOID PROPHAGE; 1.
DR PANTHER; PTHR30461:SF2; RESOLVASE HOMOLOG YNEB; 1.
DR Pfam; PF07508; Recombinase; 1.
DR Pfam; PF00239; Resolvase; 1.
DR Pfam; PF13408; Zn_ribbon_recom; 1.
DR SMART; SM00857; Resolvase; 1.
DR SUPFAM; SSF53041; Resolvase-like; 1.
DR PROSITE; PS51737; RECOMBINASE_DNA_BIND; 1.
DR PROSITE; PS00397; RECOMBINASES_1; 1.
DR PROSITE; PS51736; RECOMBINASES_3; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000018124}.
FT DOMAIN 3..152
FT /note="Resolvase/invertase-type recombinase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS51736"
FT DOMAIN 159..278
FT /note="Recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51737"
FT COILED 392..426
FT /evidence="ECO:0000256|SAM:Coils"
FT ACT_SITE 11
FT /note="O-(5'-phospho-DNA)-serine intermediate"
FT /evidence="ECO:0000256|PIRSR:PIRSR606118-50,
FT ECO:0000256|PROSITE-ProRule:PRU10137"
SQ SEQUENCE 484 AA; 55393 MW; 41D023F6B0F09D4B CRC64;
MKTGALYVRV STDDQVEYSP DAQIRLGLEY AKKNNIIIPK QFIFQDDGIS GRKATNRPAF
QELIAMAKSD EHPIDVILVW KFSRFARNQE EAIVYKNLLK KADVDVVSVS EPIPDGFIGE
LVQRIFEWMD EYYSINLSGE VMRGMTERAS RGGYNAAPPL GYKMQDGIPV IVPEQAEIVK
KIFTWYVDDK MSFFDIAVKL NTLGYRTKRN GKFQNRTVAY IIRNEFYNGK IIWNRLEHAT
RNVKDKSEWI VTDGGHDTFI SNELFTAAQE RDKVTKRSGK KVRPASTYKH WLSGLLVCSA
CGGRLVRAGK SKSGNTYFQC TAYNHASCNE SHLTNENALK PAILEALQKV LDSGTVEYVV
HSTNQEEKSE SELIETKLNR IGMKEERIKE AYRDGIDTLE EYKANKEILQ REREQLTAML
EQYSKKPEDE NESILLNKIR SAYDIIKSDN STDRQKHDAL TSVVDKIVYD KKGGALLMYF
YIND
//