ID   R5Z405_9FIRM            Unreviewed;       584 AA.
AC   R5Z405;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 27.
DE   RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN   ORFNames=BN504_00325 {ECO:0000313|EMBL:CDA28781.1};
OS   Eubacterium sp. CAG:156.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae;
OC   Eubacterium.
OX   NCBI_TaxID=1262880 {ECO:0000313|EMBL:CDA28781.1, ECO:0000313|Proteomes:UP000018124};
RN   [1] {ECO:0000313|EMBL:CDA28781.1, ECO:0000313|Proteomes:UP000018124}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MGS:156 {ECO:0000313|Proteomes:UP000018124};
RA   Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA   Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA   Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA   Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA   Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA   Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA   Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA   Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA   Wang J., Brunak S., Ehrlich S.D.;
RT   "Dependencies among metagenomic species, viruses, plasmids and units of
RT   genetic variation.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the RecJ family.
CC       {ECO:0000256|ARBA:ARBA00005915}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CDA28781.1}.
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DR   EMBL; CBBN010000055; CDA28781.1; -; Genomic_DNA.
DR   AlphaFoldDB; R5Z405; -.
DR   STRING; 1262880.BN504_00325; -.
DR   Proteomes; UP000018124; Unassembled WGS sequence.
DR   GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   Gene3D; 3.10.310.30; -; 1.
DR   Gene3D; 3.90.1640.30; -; 1.
DR   InterPro; IPR001667; DDH_dom.
DR   InterPro; IPR038763; DHH_sf.
DR   InterPro; IPR003156; DHHA1_dom.
DR   InterPro; IPR004610; RecJ.
DR   InterPro; IPR041122; RecJ_OB.
DR   NCBIfam; TIGR00644; recJ; 1.
DR   PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR   PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR   Pfam; PF01368; DHH; 1.
DR   Pfam; PF02272; DHHA1; 1.
DR   Pfam; PF17768; RecJ_OB; 1.
DR   SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:CDA28781.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:CDA28781.1};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Reference proteome {ECO:0000313|Proteomes:UP000018124}.
FT   DOMAIN          77..236
FT                   /note="DDH"
FT                   /evidence="ECO:0000259|Pfam:PF01368"
FT   DOMAIN          326..444
FT                   /note="DHHA1"
FT                   /evidence="ECO:0000259|Pfam:PF02272"
FT   DOMAIN          458..581
FT                   /note="RecJ OB"
FT                   /evidence="ECO:0000259|Pfam:PF17768"
FT   COILED          310..337
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   584 AA;  66280 MW;  4861234F045BEC46 CRC64;
     MEKWIVFAKK ADFNQIAKKY NISPMLARII RNRDIIEDKD IKEYLYGDIN ELNSPWLLKD
     MEKAVEIIKI KISQQNKIRI ICDYDIDGIC SGYILLDSLE KLGANVDIVV PHRIEDGYGI
     NKDLIKKAYD DGVDTILTCD NGIAAYEQVE YAKSLGMTIV ITDHHEVPFE EKDGTKEYIV
     PNADAVVNPK QADCEYPFKE ICGATVAYKL ITAIVNSMGR EMSSTNYLLE YVAIATIGDV
     VELQNENRII VKYGLDLLRK SKNIGLNALI DACKLNKNII DSYHIGFVIG PCLNASGRLD
     TARKAVALLR EKNQDKAKDI ATELVELNDE RKNLTEEGTK KAIEQAENYK EDKVLVIYLK
     DCHESIAGII AGRIREKYNK PCFVLTKTAT EVKGSGRSIE EYDMYKELSR IKELFTKFGG
     HKLAAGLSLP LENVDILREK LNQLTTLTDD DLCSKVWIDM QLPIPYITKE FVNELEKLKP
     FGKGNEKPCF AEKNLKVKNL KILGKEGNVI KLSLRDENNY EIPGIIFSRT SEFMEFVTNK
     FGNEEVKKAL RGMDNNITIM AVFYPNINEY NGNTQLQLVI NRFS
//