ID R5ZWK7_9BACT Unreviewed; 541 AA.
AC R5ZWK7;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Ribonuclease G {ECO:0000313|EMBL:CDA43095.1};
GN ORFNames=BN693_01123 {ECO:0000313|EMBL:CDA43095.1};
OS Prevotella sp. CAG:5226.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=1262930 {ECO:0000313|EMBL:CDA43095.1, ECO:0000313|Proteomes:UP000018184};
RN [1] {ECO:0000313|EMBL:CDA43095.1, ECO:0000313|Proteomes:UP000018184}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:5226 {ECO:0000313|Proteomes:UP000018184};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA43095.1}.
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DR EMBL; CBBW010000092; CDA43095.1; -; Genomic_DNA.
DR AlphaFoldDB; R5ZWK7; -.
DR Proteomes; UP000018184; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000018184};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 51..154
FT /note="S1 motif"
FT /evidence="ECO:0000259|SMART:SM00316"
SQ SEQUENCE 541 AA; 62012 MW; 356E6786B6B1EE77 CRC64;
MCGQTTFERI IFIFMTSEVI VDVTKKDISI ALLEDKRLVE YQREGRSEHF SVGNIYLAKV
RKLMPGLNAC FVNVGFERDA FLHYLDLGTR YHAQEKYLQL IADGRRNVTL DKVGKQPDLD
KDGSIQNTLK VGQEILVQIV KEPINTKGPR LTSELSFAGR FLVLIPFSEK ISVSSKIKSG
AERTRLKQLI QSIKPKGFGV IIRTVAENMR VAELDNEMRI LLKRWENTIA KVKQTRREAL
TLPQLAYEET SRTVALLRDL FNPSYENIYV NDQSVFNEVR NYVSLIAPEC KDIVKLYKGV
VPIFDNFSVT KQIKTSLGRT VTYKHGAYLI IEQTEALHVV DVNSGNRSKS SEGQEVNALD
VNLGAADELA RQLRLRDMGG IIVVDFIDMN LPENRQKLYE RMVENMRKDR AKHSILPLSK
FGLMQITRQR VRPVMDVNVE ETCPTCGGTG KIKPSILFTD SLETKIDTLV NKLGIKRFRL
YVHPFVAAYI NQGFFSIKRR WQMKYGMGVR VYPNQKLAYL QYAFYNTNGE EILMNQHNDM
K
//
