ID R6AW34_9PROT Unreviewed; 430 AA.
AC R6AW34;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Transposase IS605 OrfB family {ECO:0000313|EMBL:CDA45362.1};
GN ORFNames=BN492_00510 {ECO:0000313|EMBL:CDA45362.1};
OS Proteobacteria bacterium CAG:139.
OC Bacteria; Pseudomonadota.
OX NCBI_TaxID=1262986 {ECO:0000313|EMBL:CDA45362.1, ECO:0000313|Proteomes:UP000018405};
RN [1] {ECO:0000313|EMBL:CDA45362.1, ECO:0000313|Proteomes:UP000018405}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:139 {ECO:0000313|Proteomes:UP000018405};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA45362.1}.
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DR EMBL; CBBV010000197; CDA45362.1; -; Genomic_DNA.
DR AlphaFoldDB; R6AW34; -.
DR Proteomes; UP000018405; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000018405};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 196..293
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 317..347
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 430 AA; 49657 MW; 9782BB13B06DCEC1 CRC64;
MIQKVERHVI RKNNANWQAC HKLCSLSRKL GNCAVYLLRH RVFEKAPVLT RKELDTELRH
QYGSDYRAMP SAASAQRQGQ VIAKQFKGFA KAAAEYSKHP EKFQGKPRLP GYRKKYRTFY
VGRNGYQIRD GQLTITGGKD IGFSPIRVVC CERQEFNAKA EEAIAGDLRI IPMENTFIVE
LTYRVDKDEC KNSKSVSLNP NEALCCDLGI DNFATFVSTK PGVRPFLVKG KILKSINQRY
NKQVAELRSK KHHEHIRIKG VKRYWQLQDL MHKISRLAVN FCLAHDLGRI VIGTNRNWKQ
RLNLGKRNNQ NFVMLPHNKF IEMVRYKAEE YGIQVTVREE SYTSKASAMD FDEIPDFDPK
ERKPAISFSG KRFKRGLYQS SKRHLINADI NGAANIGRKE LGDEWLKKLL ELDGASLWTR
PQLYETCMNV
//
