ID R6D0L5_9FIRM Unreviewed; 935 AA.
AC R6D0L5;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA82208.1};
GN ORFNames=BN516_00758 {ECO:0000313|EMBL:CDA82208.1};
OS Firmicutes bacterium CAG:176.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263007 {ECO:0000313|EMBL:CDA82208.1, ECO:0000313|Proteomes:UP000017932};
RN [1] {ECO:0000313|EMBL:CDA82208.1, ECO:0000313|Proteomes:UP000017932}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:176 {ECO:0000313|Proteomes:UP000017932};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=FMN; Xref=ChEBI:CHEBI:58210;
CC Evidence={ECO:0000256|ARBA:ARBA00001917};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA82208.1}.
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DR EMBL; CBCO010000185; CDA82208.1; -; Genomic_DNA.
DR AlphaFoldDB; R6D0L5; -.
DR Proteomes; UP000017932; Unassembled WGS sequence.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR Gene3D; 3.30.70.20; -; 1.
DR Gene3D; 1.10.1060.10; Alpha-helical ferredoxin; 1.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 2.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR028261; DPD_II.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR023753; FAD/NAD-binding_dom.
DR InterPro; IPR009051; Helical_ferredxn.
DR PANTHER; PTHR43073; DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]; 1.
DR PANTHER; PTHR43073:SF2; DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]; 1.
DR Pfam; PF00037; Fer4; 2.
DR Pfam; PF14691; Fer4_20; 1.
DR Pfam; PF07992; Pyr_redox_2; 1.
DR PRINTS; PR00419; ADXRDTASE.
DR SUPFAM; SSF46548; alpha-helical ferredoxin; 2.
DR SUPFAM; SSF51971; Nucleotide-binding domain; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 2.
PE 4: Predicted;
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000017932}.
FT DOMAIN 318..347
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 866..895
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 935 AA; 103547 MW; DD5ED4755674F060 CRC64;
MRDINGSKPT SFPLDEEKLS FKIPCPDRPP REKILKLGSM ITNRIGLKAT ADDPEYWGLD
ALVTDEMADV ALKMGVRKPK TIEQLMKLTK MEREPLQKLL DEMAWLGLIE YNWENLDGKN
PNHEKRYILP LFVPGSAEFL NMRRSQIDAH PEVAAFFERM TMLPLEKITP MVPPGGAGIG
MHVIPVEKAI ETEQEAIGLE KISYWLHKYE GKYAKSMCSC RASRDKLGEG CGDDVENWCI
AVGDMADYVV QTQRGEYITY DEAMAIFKQA EDNGFVHQIT NIDGEQKIFG ICNCNVNVCN
ALRTSQMFNT PNMSRSAYVA AVETEKCVAC GRCVENCPAG AVKLGQKLCT KDGYIEYPRA
ELPDEVKWGP EKWSVDYRDR NRINCYDTGT APCKTACPAH IAVQGYLKLA AQGKYREALQ
LIKRENPFPA VCGRICNRRC EDACTRGTVD EAVAIDEVKR FIAQQDLDAE TRFIPEKVIP
KVDGEFSEKI AIIGGGPAGM SCAYYLAEKG YRPTVFEKES RPGGMLMNAI PSFRLEKDVV
EAEIDVLRAL GVEFRCGVEV GKDITIAQLR EEGYKGFYVA VGLQHGGALA VPGGDVENVI
SGIDFIRGVH LRDEKTLKGR VVVIGGGNIA ADVARTAVRC GAESVSLYCL EGYEEMPMGE
EDRSECEREG IAIYAGWGPK EVQTENGKAA NIAFVKCLSV KDESGRFAPV YDENTVQMAP
CGTVLYCIGQ KAEWKTLLAG TQVEFNPNGT AKADPVTYQT AEPDIFVGGD AYTGQKFAID
AIAAGKQGAI SLHRYVQGAT LTIGRDRRQF IELDKKNALI AVDSYDNTPR QRIGYNDALR
KTFRDERVAF TAEQVKAETA RCLGCGASIV DPNKCIGCGV CTTKCAFDAI HLHRERPECS
TMYACEDKMK AILPYMIKRN IKIKKAERRA KKAAK
//