ID R6D443_9BACE Unreviewed; 726 AA.
AC R6D443;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Putative chondroitin AC/alginate lyase {ECO:0000313|EMBL:CDA82485.1};
GN ORFNames=BN772_01007 {ECO:0000313|EMBL:CDA82485.1};
OS Bacteroides sp. CAG:754.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=1262750 {ECO:0000313|EMBL:CDA82485.1, ECO:0000313|Proteomes:UP000017906};
RN [1] {ECO:0000313|EMBL:CDA82485.1, ECO:0000313|Proteomes:UP000017906}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:754 {ECO:0000313|Proteomes:UP000017906};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA82485.1}.
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DR EMBL; CBCP010000011; CDA82485.1; -; Genomic_DNA.
DR AlphaFoldDB; R6D443; -.
DR Proteomes; UP000017906; Unassembled WGS sequence.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR Gene3D; 2.70.98.70; -; 1.
DR Gene3D; 1.50.10.100; Chondroitin AC/alginate lyase; 1.
DR InterPro; IPR008397; Alginate_lyase_dom.
DR InterPro; IPR008929; Chondroitin_lyas.
DR InterPro; IPR012480; Hepar_II_III.
DR PANTHER; PTHR39210; HEPARIN-SULFATE LYASE; 1.
DR PANTHER; PTHR39210:SF1; HEPARIN-SULFATE LYASE; 1.
DR Pfam; PF05426; Alginate_lyase; 1.
DR Pfam; PF07940; Hepar_II_III; 1.
DR SUPFAM; SSF48230; Chondroitin AC/alginate lyase; 1.
PE 4: Predicted;
KW Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000313|EMBL:CDA82485.1};
KW Periplasm {ECO:0000256|ARBA:ARBA00022764};
KW Reference proteome {ECO:0000313|Proteomes:UP000017906};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 81..290
FT /note="Alginate lyase"
FT /evidence="ECO:0000259|Pfam:PF05426"
SQ SEQUENCE 726 AA; 81898 MW; 30DA28641818E117 CRC64;
MVLGGCLFSF AQHPSLLFTQ EEVNEMRAGE GTVPAFDKSL SEVLTAADAA INYPVSVPVP
IDGGGGVVHE QHKSNYYAMF HCGVAYQLTG DKKYAAYVAD MLEAYAKLYP TLGFHPLQLS
PVPGRLFWQT LNESVWLVHT AVAYDCIYNT LSPKQRSTIE KNLFVPMADF IMDGMGDNHA
NNKTFNKMHN HATWATVAVG MIGFTMNRED YVKKALYGSD ETGKRGGFIR QMDYLFSPDG
YFTEGAYYQR YAIWPFVIFA QCIENKLPDL KIFNYRDNIL SKALSTLVQL SYEGEFFHIN
DALLKGLSAQ ELVYAVDILY NVNPSDKSLL SVANKYQHTY LPTIGGFKVA RDIARGEAAP
IIYRSSVFRD GRKGDEGGIA VIRSTDSNLN SALTLKATSH GLSHGHFDKL TMAYYDNGNE
ILSDYGASRF LNIEAKYKGH YTRENQSFAK QTIAHNTLVV DETSHFAGDM KISSRYHSDI
IYHDFNGRHF QVMVAKDTNA YPGVEMKRTL AYVTTPFLQF PLILDVLQAN ADKEHQYDYP
LWYNGHFVSL NFPYTKAGNE LKTLGTKDGY QHLWLEAWGQ NENKNTSSFT FVNKNRFYTI
STATTPQTEM KMLRLGANDP DFNLRNETAF LIREKARKNH TFATSIETHG EYDVVRETSS
NLTSSCEEVK VVMDTASYTV VKAIYKGGHF VMLCLSNTDN SKEKKHNLSI DGLNYTWNGR
CGIFMK
//
