ID   R6IS38_9CLOT            Unreviewed;       589 AA.
AC   R6IS38;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:CDB52035.1};
GN   ORFNames=BN539_00267 {ECO:0000313|EMBL:CDB52035.1};
OS   Clostridium sp. CAG:217.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=1262779 {ECO:0000313|EMBL:CDB52035.1, ECO:0000313|Proteomes:UP000018364};
RN   [1] {ECO:0000313|EMBL:CDB52035.1, ECO:0000313|Proteomes:UP000018364}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MGS:217 {ECO:0000313|Proteomes:UP000018364};
RA   Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA   Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA   Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA   Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA   Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA   Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA   Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA   Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA   Wang J., Brunak S., Ehrlich S.D.;
RT   "Dependencies among metagenomic species, viruses, plasmids and units of
RT   genetic variation.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the LytR/CpsA/Psr (LCP) family.
CC       {ECO:0000256|ARBA:ARBA00006068}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CDB52035.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CBDU010000100; CDB52035.1; -; Genomic_DNA.
DR   AlphaFoldDB; R6IS38; -.
DR   STRING; 1262779.BN539_00267; -.
DR   Proteomes; UP000018364; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.630.190; LCP protein; 1.
DR   InterPro; IPR004474; LytR_CpsA_psr.
DR   NCBIfam; TIGR00350; lytR_cpsA_psr; 1.
DR   PANTHER; PTHR33392; POLYISOPRENYL-TEICHOIC ACID--PEPTIDOGLYCAN TEICHOIC ACID TRANSFERASE TAGU; 1.
DR   PANTHER; PTHR33392:SF6; POLYISOPRENYL-TEICHOIC ACID--PEPTIDOGLYCAN TEICHOIC ACID TRANSFERASE TAGU; 1.
DR   Pfam; PF03816; LytR_cpsA_psr; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000018364};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        212..232
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          319..477
FT                   /note="Cell envelope-related transcriptional attenuator"
FT                   /evidence="ECO:0000259|Pfam:PF03816"
FT   REGION          14..160
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          176..204
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        55..71
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        183..204
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   589 AA;  65305 MW;  E86712411635A9D1 CRC64;
     MAKDYNIDDI LSEVKQRRAE QESNLKSAPA PKAAPVQTDA NREAYAGKLV EELLGPEKLA
     VKPEPKEKKA AAPQPPKAAP HPAPAPREKA EPQQKAAPAP EAKRAPKPAA PKADTADVPV
     QQVRRKLQPP PPAYENRDRT VTPDKPSQKP ENQPPLEPAN LRHQATDEMI DLFSLSGKAE
     NAPAAADKKR KSGKKQKDAN AMPWRKTKKG KISIAIIVVL AVLIVAGGVF AVCYVNGLLG
     KFTDEADDYQ KTDTSYHGMD FLKENFPEIK EPSAADATTY KEYLKNWYKN GDPVSSTHVK
     NILLIGEDTR EEQISDTSRA DSAIIASVNI DTGKITLTSV LRDLYVYFEA NGEGQYDKIN
     GAASMGGMKE YIKTVERYYK IQIDNYAVVN FASFPKIIDS LGGVTITITD REINEINNHP
     KRYGNVYIEK SYEGTEGKQK LNGKQALAYC RIRKIDTDNA RADRQKTVLL QVFKKMKGSS
     TTELLKVVND LVGYVYTGYS KKELLSLATY ALSNGWMNYE TQTFSVPTPD HARGGTYLIG
     PTQLTPSRSG GLWLWKSDIP QDAYDLQMKI YGKSNIKLAE NRCDYCNLL
//