ID R6JZD1_9FIRM Unreviewed; 255 AA.
AC R6JZD1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=BN564_01799 {ECO:0000313|EMBL:CDB68163.1};
OS Eubacterium sp. CAG:252.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae;
OC Eubacterium.
OX NCBI_TaxID=1262887 {ECO:0000313|EMBL:CDB68163.1, ECO:0000313|Proteomes:UP000017970};
RN [1] {ECO:0000313|EMBL:CDB68163.1, ECO:0000313|Proteomes:UP000017970}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:252 {ECO:0000313|Proteomes:UP000017970};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDB68163.1}.
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DR EMBL; CBEA010000094; CDB68163.1; -; Genomic_DNA.
DR AlphaFoldDB; R6JZD1; -.
DR Proteomes; UP000017970; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd06260; DUF820-like; 1.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR Gene3D; 3.90.1570.10; tt1808, chain A; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR012296; Nuclease_put_TT1808.
DR InterPro; IPR011335; Restrct_endonuc-II-like.
DR InterPro; IPR008538; Uma2.
DR PANTHER; PTHR34107; SLL0198 PROTEIN-RELATED; 1.
DR PANTHER; PTHR34107:SF4; SLL1222 PROTEIN; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF05685; Uma2; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF52980; Restriction endonuclease-like; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
FT DOMAIN 6..61
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 255 AA; 29106 MW; 4644D2170D6672F3 CRC64;
MTIEEMKDKK KEKGYSYEQM ADLSGIPLGT IQKIFSGETK SPRYDTLIAL EQLFTEPLEV
RETASCYNAD RNGSYTLDDY YALPDDQRVE LIDGYFYTML SPTFGHQSIA GEIHRQIANY
IMDNGVSCRP FIAPVDVQLD CDNKTMVEPD VGIVCDTSKI KRFGIYGAPD FLVEVISPST
KKRDYTLKLS KYIEAGVREY WIVDAAQEKI LVYFFESDNY PVIYGFDKPV PVNIYEGNLA
IDFTNIAKWL KDGME
//
