ID R6MMH7_9FIRM Unreviewed; 203 AA.
AC R6MMH7;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Putative ribonuclease M5 {ECO:0000313|EMBL:CDC00868.1};
GN ORFNames=BN647_00779 {ECO:0000313|EMBL:CDC00868.1};
OS Firmicutes bacterium CAG:41.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263021 {ECO:0000313|EMBL:CDC00868.1, ECO:0000313|Proteomes:UP000018139};
RN [1] {ECO:0000313|EMBL:CDC00868.1, ECO:0000313|Proteomes:UP000018139}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:41 {ECO:0000313|Proteomes:UP000018139};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC00868.1}.
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DR EMBL; CBEM010000251; CDC00868.1; -; Genomic_DNA.
DR AlphaFoldDB; R6MMH7; -.
DR Proteomes; UP000018139; Unassembled WGS sequence.
DR Gene3D; 3.40.1360.10; -; 1.
DR InterPro; IPR025156; RNase_M5_C.
DR InterPro; IPR006171; TOPRIM_domain.
DR PANTHER; PTHR39156:SF2; DNA PRIMASE (BACTERIAL TYPE) AND SMALL PRIMASE-LIKE PROTEINS; 1.
DR PANTHER; PTHR39156; RIBONUCLEASE M5; 1.
DR Pfam; PF13331; DUF4093; 1.
DR Pfam; PF13662; Toprim_4; 1.
DR SMART; SM00493; TOPRIM; 1.
DR SUPFAM; SSF110455; Toprim domain; 1.
DR PROSITE; PS50880; TOPRIM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018139}.
FT DOMAIN 5..86
FT /note="Toprim"
FT /evidence="ECO:0000259|PROSITE:PS50880"
SQ SEQUENCE 203 AA; 22500 MW; 3EFFF2261C68F836 CRC64;
MYKIKETIVV EGIYDKIKLS RFIDAVIIVT NGFCVFSDDR ILESIKKMAD ETGIVILTDS
DSAGFKIRNY IKQSLPKEKV KHAYVPDVYG KEKRKREPGK EGLLGVEGIK DDIILDSLKK
AGCTIDGSAT AVKEGREITK ADLYKAGLSG GEGSGEKRNA LAHSLGIPMK ISANMLLDLL
NRLLNYDEFC EIVQNIDDLK EEI
//
