ID R6NB53_9FIRM Unreviewed; 901 AA.
AC R6NB53;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=4Fe-4S ferredoxin-type domain-containing protein {ECO:0000259|PROSITE:PS51379};
GN ORFNames=BN627_02035 {ECO:0000313|EMBL:CDC08415.1};
OS Lachnospiraceae bacterium CAG:364.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=1262983 {ECO:0000313|EMBL:CDC08415.1, ECO:0000313|Proteomes:UP000017986};
RN [1] {ECO:0000313|EMBL:CDC08415.1, ECO:0000313|Proteomes:UP000017986}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:364 {ECO:0000313|Proteomes:UP000017986};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=FMN; Xref=ChEBI:CHEBI:58210;
CC Evidence={ECO:0000256|ARBA:ARBA00001917};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC08415.1}.
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DR EMBL; CBER010000077; CDC08415.1; -; Genomic_DNA.
DR AlphaFoldDB; R6NB53; -.
DR Proteomes; UP000017986; Unassembled WGS sequence.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR Gene3D; 1.10.1060.10; Alpha-helical ferredoxin; 1.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 2.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR028261; DPD_II.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR023753; FAD/NAD-binding_dom.
DR InterPro; IPR009051; Helical_ferredxn.
DR PANTHER; PTHR43073; DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]; 1.
DR PANTHER; PTHR43073:SF2; DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]; 1.
DR Pfam; PF00037; Fer4; 2.
DR Pfam; PF14691; Fer4_20; 1.
DR Pfam; PF07992; Pyr_redox_2; 1.
DR PRINTS; PR00419; ADXRDTASE.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR SUPFAM; SSF46548; alpha-helical ferredoxin; 2.
DR SUPFAM; SSF51971; Nucleotide-binding domain; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 2.
DR PROSITE; PS51379; 4FE4S_FER_2; 2.
PE 4: Predicted;
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000017986}.
FT DOMAIN 288..317
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 837..866
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 901 AA; 100472 MW; 8D977EF85523367E CRC64;
MAEKRELILK LGQKITDRIG HKVTVDDPEY WGLACIVTDE MAEVALKMKV RKPMTFPQLL
KATGKEEKEL EKLLEEMSIV GLLEYNWENP QKEKQYILPM FVPGSAEFTN MNRKQLEEHP
ELGRFFERMS RLPLEKVTPM VPPGGAGIGM HVIPVEKAIE MENQSIDIEH ISHWLKKYEG
KYAASPCSCR LSRQTYEEGC ADDPEDWCIA VGDMADYVVE TQKGGRYITY EEVLDILKKA
EDNGFVHQIT NIDGKNKIFA ICNCNVNVCY ALRTSQLFNT PNMSRSAYVA HVKTENCVAC
GRCVEYCPAG AVKLGQKLCT KDGPIEYPKH ELPDAMKWGP EKWDEDYRDN NRINCYDTGT
APCKTACPAH IAVQGYLKKA AQGKYREALA LIKKENPFPA VCGHICNRRC EDACTRGTID
QAVAIDEVKK FIAKQDLTAE NRYIPPIIPP TTGRLFEEKI AIIGGGPAGL SCAFYLAEKG
YKPTVFEKNE KPGGMLVYGI PSFKLEKDVV EAEIDVMRQM GVEIKCGIEV GKDITLEELR
KQGYKAFYLA IGCQGGRKAN IQGEDAEGVM TAVDFLRTVG DNQNYPVEGR AVVVGGGNVA
IDVARTASRC GASEVSMFCL EGREIMPASE EEITEAQEEG ITLNCGWGPK EILTENGKVK
GIVFKKCLSV FDENKRFAPK FDEAVTMTVP CERVFLSIGQ SIVWGNLLEG SKVELGRGNG
AVADKVTYQT AEPDIFVGGD VYTGPKFAID AIAAGKEGAI SIHRFVQPHS SLTIGRNRRQ
FIELDKSNIQ IEEYDNSSRQ IPGMRKDIDA HKSFRDAKEA FTEEQVKKET ARCLGCGASV
VDENKCIGCG VCTTKCEFDA IHLYREHPEC STMHKSEDKM KVILPYAFKR EMKIRFGKKE
K
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