ID R6PMX5_9FIRM Unreviewed; 283 AA.
AC R6PMX5;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE SubName: Full=Transcriptional antiterminator {ECO:0000313|EMBL:CDC11082.1};
GN ORFNames=BN662_00107 {ECO:0000313|EMBL:CDC11082.1};
OS Roseburia sp. CAG:45.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Roseburia.
OX NCBI_TaxID=1262947 {ECO:0000313|EMBL:CDC11082.1, ECO:0000313|Proteomes:UP000018173};
RN [1] {ECO:0000313|EMBL:CDC11082.1, ECO:0000313|Proteomes:UP000018173}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:45 {ECO:0000313|Proteomes:UP000018173};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC11082.1}.
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DR EMBL; CBET010000046; CDC11082.1; -; Genomic_DNA.
DR AlphaFoldDB; R6PMX5; -.
DR Proteomes; UP000018173; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.20.58.1950; -; 1.
DR Gene3D; 1.20.890.100; -; 1.
DR Gene3D; 2.30.24.10; CAT RNA-binding domain; 1.
DR Gene3D; 1.10.1790.10; PRD domain; 1.
DR InterPro; IPR004341; CAT_RNA-bd_dom.
DR InterPro; IPR036650; CAT_RNA-bd_dom_sf.
DR InterPro; IPR011608; PRD.
DR InterPro; IPR036634; PRD_sf.
DR PANTHER; PTHR30185; CRYPTIC BETA-GLUCOSIDE BGL OPERON ANTITERMINATOR; 1.
DR PANTHER; PTHR30185:SF15; CRYPTIC BETA-GLUCOSIDE BGL OPERON ANTITERMINATOR; 1.
DR Pfam; PF03123; CAT_RBD; 1.
DR Pfam; PF00874; PRD; 2.
DR SMART; SM01061; CAT_RBD; 1.
DR SUPFAM; SSF63520; PTS-regulatory domain, PRD; 2.
DR SUPFAM; SSF50151; SacY-like RNA-binding domain; 1.
DR PROSITE; PS51372; PRD_2; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018173};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 65..170
FT /note="PRD"
FT /evidence="ECO:0000259|PROSITE:PS51372"
FT DOMAIN 171..280
FT /note="PRD"
FT /evidence="ECO:0000259|PROSITE:PS51372"
SQ SEQUENCE 283 AA; 33481 MW; 2EC96DFE4E9CE0E3 CRC64;
MVIYKILNNN LILSRDGQGH EVIVKGCGIA FQKKKGQQVE ESRIEKIFTA ENAQISKEIQ
GYLTAIPEKY LDFVGAFVNE VKEKEGMKLN DSIYFSLSDH IMGAISRLEN GIRLQNMLLL
DIKQLYHKEY EIGLELLKKV NEMFKVDLSA DEAGFFALHF VNAEDGGKTD SYQISIIVHQ
ILDIVEKYYD NMEFQEDNLY YQRFLTHLKY FAQRFLHKEL HYDENQELFK IIKEQYREAY
GCVKMIYLMM EEEYKYAMTE DEMLYLTIHI QKITEDHKRL KNL
//
