ID R6QCP3_9CLOT Unreviewed; 682 AA.
AC R6QCP3;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=TraG/TraD family protein {ECO:0000313|EMBL:CDC30859.1};
GN ORFNames=BN685_00124 {ECO:0000313|EMBL:CDC30859.1};
OS Clostridium sp. CAG:508.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262815 {ECO:0000313|EMBL:CDC30859.1, ECO:0000313|Proteomes:UP000018169};
RN [1] {ECO:0000313|EMBL:CDC30859.1, ECO:0000313|Proteomes:UP000018169}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:508 {ECO:0000313|Proteomes:UP000018169};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the VirD4/TraG family.
CC {ECO:0000256|ARBA:ARBA00008806}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC30859.1}.
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DR EMBL; CBFC010000007; CDC30859.1; -; Genomic_DNA.
DR AlphaFoldDB; R6QCP3; -.
DR STRING; 1262815.BN685_00124; -.
DR Proteomes; UP000018169; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003688; TraG/VirD4.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF02534; T4SS-DNA_transf; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018169};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..37
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 72..96
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT COILED 595..630
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 682 AA; 77158 MW; 7F49BFED0E3B8F3F CRC64;
MKVRKTLKDN KKSLIIIGIL WIILAIILVS PIAYSIVEST NNGIFDFSIF IEQIFSNITS
FNTFGKVFGE KYIGAFFKTL AYYTIIYIVF STIGLFRSKA KSDYKDIEHG SSDWSEGGEE
YQVLSKNKGI LLAQNHYLPV DKRGNVNVLV VGGSGSGKSA SYSIPNAYQM LGSYVFTDPK
GELYDKTSGF LKQNGYDIKV LNLVNPANSD GYNPLMHISS EIDVDVIANT IVKGQKSEAG
SSSDPYWDDM AEMLLKALIY YLIATRPEEE QNLASCSELV RAANTNGGSN LLTELMNQLP
YDHPARMNYK SIEIAPEKTY GSILSSLQSK LGKFDSKEIA EVTSTDTINF EDIGSKKTAV
YVISSDTHTA YDFLLTIFFS QMIQQLYNFA DANGGRLKMP TFFICDEFAN IGKIPDFDKK
ISTSRSRGIS FSVILQNLDQ LEAVYEKSYE TIMGNCDTHV FLGSNSFKTV EYFSKALGEK
TITRDSTSIN RDKHYHRQGI SESDQVLGRA LMTPDELRRM DNDECIIYEK GIKPVKAKKY
YYFESPMAKK LAAYTLNHLD FNVGDRGKWR KYNPYNPYVE DEENSKKNDL KVESLDDLFD
DIDDKKENIN KQEQNNINDE NISNNKLNME NMKINKKQTI DEMADDAPVL PQESEENEIF
SADVQKELEA KFDELFGPID EN
//