ID R6R7L1_9FIRM Unreviewed; 574 AA.
AC R6R7L1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=BN606_00134 {ECO:0000313|EMBL:CDC38906.1};
OS Butyrivibrio sp. CAG:318.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC Butyrivibrio; environmental samples.
OX NCBI_TaxID=1262761 {ECO:0000313|EMBL:CDC38906.1, ECO:0000313|Proteomes:UP000018075};
RN [1] {ECO:0000313|EMBL:CDC38906.1, ECO:0000313|Proteomes:UP000018075}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:318 {ECO:0000313|Proteomes:UP000018075};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC38906.1}.
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DR EMBL; CBFF010000056; CDC38906.1; -; Genomic_DNA.
DR AlphaFoldDB; R6R7L1; -.
DR STRING; 1262761.BN606_00134; -.
DR Proteomes; UP000018075; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:CDC38906.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:CDC38906.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000018075}.
FT DOMAIN 77..236
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 324..446
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 460..566
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
FT COILED 310..344
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 574 AA; 64547 MW; C0D8B6DF90274E47 CRC64;
MQKWRVYSKK ADFDAIGSRF NIDPVTARII RNRDVTDMEN VDMYLNGTLD RLHDPMMMKD
MDKAVSVIAS SIRDNKHIRI IGDYDIDGIC SIYILFKGLK ICGADVDYEV PDRITDGYGI
NENLIKQAYE AGVEVIITCD NGIAAASQID YANELGMTVV ITDHHDVPYE ETDNGRRYII
PKAAAVVDPK QNDCRYPFKM LCGAGIAYKF IDCMVKEFQT GDSVMPELLQ FAAIATVGDI
VDLLDENRII VKEGLKLIAN TGNYGLNALM AVTGVSRESI NAYHIGFVLG PCLNASGRLD
SAKRALKMLV TDDRAEAERH AGELKDLNEE RKKLTSEAVD KAVDMVENSS LKDDRVLVIF
LPDCHESIAG IVAGRIREKY YKPVIVLTRG EQEAKGSARS IESYNMFEKL SECKDLFTRF
GGHPMAAGLS LPEENIPEFR RRINEHCNLS EEDLTETVWI DVPMPLEYIN EKLILELDGL
EPFGKANPKP VFADKNISIR NIRAIGKDKQ YTRMTIAKDS GMVIDAVGFF PCTELETVYN
KNGRISCTYY PEINEFRDKK QIQVCVTGYR IDRI
//
