ID R6U1S0_9FIRM Unreviewed; 163 AA.
AC R6U1S0;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE SubName: Full=Putative CarD family transcriptional regulator {ECO:0000313|EMBL:CDC74041.1};
GN ORFNames=BN503_00824 {ECO:0000313|EMBL:CDC74041.1};
OS Oscillibacter sp. CAG:155.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Oscillibacter; environmental samples.
OX NCBI_TaxID=1262910 {ECO:0000313|EMBL:CDC74041.1, ECO:0000313|Proteomes:UP000017942};
RN [1] {ECO:0000313|EMBL:CDC74041.1, ECO:0000313|Proteomes:UP000017942}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:155 {ECO:0000313|Proteomes:UP000017942};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC74041.1}.
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DR EMBL; CBFT010000236; CDC74041.1; -; Genomic_DNA.
DR AlphaFoldDB; R6U1S0; -.
DR Proteomes; UP000017942; Unassembled WGS sequence.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 1.20.58.1290; CarD-like, C-terminal domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR042215; CarD-like_C.
DR InterPro; IPR048792; CarD_C.
DR PANTHER; PTHR38447:SF1; RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR CARD; 1.
DR PANTHER; PTHR38447; TRANSCRIPTION FACTOR YDEB-RELATED; 1.
DR Pfam; PF21095; CarD_C; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000017942}.
FT DOMAIN 1..111
FT /note="CarD-like/TRCF RNAP-interacting"
FT /evidence="ECO:0000259|SMART:SM01058"
SQ SEQUENCE 163 AA; 18357 MW; 14D568D9DB0758E1 CRC64;
MFSVGDLVVH PMHGAGVIDD IVRERVAGST QEYYVFKMPV GGLLLKIPIA KSQLIGLRAI
IGPAEAERLI SSIPGIAVDQ DNNWNKRYRE NLERLKSGDL YQVARVIKGL MHRDRRRGLS
TGERKMLHAA RQILLSELVL SEHEAYDVIE TRVDRAMMQS PVQ
//