ID R6VXJ9_9FIRM Unreviewed; 311 AA.
AC R6VXJ9;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Sugar-binding domain protein {ECO:0000313|EMBL:CDC96721.1};
GN ORFNames=BN635_00519 {ECO:0000313|EMBL:CDC96721.1};
OS Roseburia sp. CAG:380.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Roseburia.
OX NCBI_TaxID=1262946 {ECO:0000313|EMBL:CDC96721.1, ECO:0000313|Proteomes:UP000017909};
RN [1] {ECO:0000313|EMBL:CDC96721.1, ECO:0000313|Proteomes:UP000017909}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:380 {ECO:0000313|Proteomes:UP000017909};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC96721.1}.
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DR EMBL; CBGD010000324; CDC96721.1; -; Genomic_DNA.
DR AlphaFoldDB; R6VXJ9; -.
DR STRING; 1262946.BN635_00519; -.
DR Proteomes; UP000017909; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProt.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR46847; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR PANTHER; PTHR46847:SF1; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000017909};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..311
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004434597"
FT DOMAIN 42..291
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 311 AA; 31877 MW; BFDBDBAC7F72CA2D CRC64;
MKKLVSLLLS MLMICSLAGC GIVIDGEGGS TGSKASGASG AIGLSISTQN NPFFVTLAEG
AKKAAKQAGV PLTVVDASDD ATKQVSDIED LVSKNVSVLI VNPVDSDAVT GAVEAAIAKG
VRVISVDRVV NGVDIDCQIA SDNVAGAELA TQYIVDTLGE NVKTAELIGT SGASAAIDRS
QGFHNIADKK LKVVASQTAD FDRAQGMTVM ENMLQADSSI QAVFAGNDEM ALGAVEAISG
AKKDVLVVGF DATDDAIEAI RQGRMGATIA QQPDLIGSTA VENAIRLTKG ESIPKEIPVE
VTLITKDTVD K
//