ID R6XJM3_9FIRM Unreviewed; 335 AA.
AC R6XJM3;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=Periplasmic binding protein domain-containing protein {ECO:0000259|Pfam:PF13407};
GN ORFNames=BN605_02090 {ECO:0000313|EMBL:CDD06537.1};
OS Dorea sp. CAG:317.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Dorea.
OX NCBI_TaxID=1262873 {ECO:0000313|EMBL:CDD06537.1, ECO:0000313|Proteomes:UP000018262};
RN [1] {ECO:0000313|EMBL:CDD06537.1, ECO:0000313|Proteomes:UP000018262}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:317 {ECO:0000313|Proteomes:UP000018262};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDD06537.1}.
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DR EMBL; CBGJ010000008; CDD06537.1; -; Genomic_DNA.
DR AlphaFoldDB; R6XJM3; -.
DR STRING; 1262873.BN605_02090; -.
DR Proteomes; UP000018262; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProt.
DR CDD; cd19971; PBP1_ABC_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR PANTHER; PTHR46847:SF2; ABC TRANSPORTER SUGAR-BINDING PROTEIN; 1.
DR PANTHER; PTHR46847; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000018262};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..335
FT /note="Periplasmic binding protein domain-containing
FT protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5038718092"
FT DOMAIN 53..309
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 335 AA; 37022 MW; BDAB8CF5FA87D751 CRC64;
MFKKKSFIMA FILIISMIGM TACKKNVGAP EDNAQAEENE DETNTEETQE HLIGFSVIDM
ENPYFITLES AAKAELEEDG YRMITKNPET DPQLQETQIQ EMIDEGIEAI ILSPVDWEKI
TPSLQALKKA GVKIINVDTQ VKEMEYVDAY IGSDNQKAGY ICGEDLITKC PDGGKIAILE
CPTQNSINDR ITGFEEAIAQ AENGFEVVER MDTKGEFELA LEAAQKILEE HPDISAIMCG
NDQLAVAAKA AVNVAELDNV IIYGVDGSPD IKKELKKPEN QIAGTAAQSP INMGKQASLT
AVQVLNGEEY EKEVYEDVFM INRDNVDMYG TDGWQ
//