ID R6YSK9_9BACE Unreviewed; 438 AA.
AC R6YSK9;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=HTH merR-type domain-containing protein {ECO:0000259|PROSITE:PS50937};
GN ORFNames=BN762_01813 {ECO:0000313|EMBL:CDD31521.1};
OS Bacteroides sp. CAG:714.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=1262749 {ECO:0000313|EMBL:CDD31521.1, ECO:0000313|Proteomes:UP000018068};
RN [1] {ECO:0000313|EMBL:CDD31521.1, ECO:0000313|Proteomes:UP000018068}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:714 {ECO:0000313|Proteomes:UP000018068};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the outer membrane factor (OMF) (TC 1.B.17)
CC family. {ECO:0000256|ARBA:ARBA00007613}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDD31521.1}.
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DR EMBL; CBGW010000006; CDD31521.1; -; Genomic_DNA.
DR AlphaFoldDB; R6YSK9; -.
DR Proteomes; UP000018068; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0015562; F:efflux transmembrane transporter activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.20.1600.10; Outer membrane efflux proteins (OEP); 1.
DR InterPro; IPR000551; MerR-type_HTH_dom.
DR InterPro; IPR003423; OMP_efflux.
DR PANTHER; PTHR30026; OUTER MEMBRANE PROTEIN TOLC; 1.
DR PANTHER; PTHR30026:SF21; SLR1270 PROTEIN; 1.
DR Pfam; PF02321; OEP; 2.
DR SUPFAM; SSF56954; Outer membrane efflux proteins (OEP); 1.
DR PROSITE; PS50937; HTH_MERR_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000018068}.
FT DOMAIN 1..12
FT /note="HTH merR-type"
FT /evidence="ECO:0000259|PROSITE:PS50937"
FT COILED 126..183
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 365..392
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 438 AA; 51012 MW; D3B294EDD2CC0392 CRC64;
MPLKAIKRLL ITGWCMLLYT NLYAQQDTLH LSLQQLFERG TEQHLQLTAD RLKEKIAHER
TKTARTTRLP ELNIGLKGGF LGQPVIWQNG MSNPTYPDSP DWQQNYTIDF TQPIYQGGKI
RYSIRQADLE EEIARLQTTT DQADIKLVLL EQYLNLFSLY KQYLVLNRKI NESERRLKDI
RQMKAEGIIT NNDVLRSEMQ LTNDRLSKNE TENNIRIVSQ QLNLLIGLDE HLLLIPDTTL
LSQECPTTEY EDYVNRAVLS DPALLLLRKQ TELAENNIRL TRAEQLPRLS LTASNTLARP
VSRTLTDMYN NSWNIGLSFS YPLSSLYRNR HKMKEARQNV LLMQNVEEQK QQHIRMNVQA
ALLKHHEATD RVEALRLSVK QAEENYRIMQ NRYMNQLAIL TDLLDADNLR LNAELQLTTA
RTQVIYTYYE LQRAIGAL
//