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Database: UniProt
Entry: R6YVD2_9CLOT
LinkDB: R6YVD2_9CLOT
Original site: R6YVD2_9CLOT 
ID   R6YVD2_9CLOT            Unreviewed;       155 AA.
AC   R6YVD2;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   23-MAY-2018, entry version 22.
DE   RecName: Full=Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00820398};
GN   Name=rimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN   ORFNames=BN593_00730 {ECO:0000313|EMBL:CDD37870.1};
OS   Clostridium sp. CAG:299.
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
OC   Clostridium; environmental samples.
OX   NCBI_TaxID=1262792 {ECO:0000313|EMBL:CDD37870.1, ECO:0000313|Proteomes:UP000017929};
RN   [1] {ECO:0000313|EMBL:CDD37870.1, ECO:0000313|Proteomes:UP000017929}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MGS:299 {ECO:0000313|Proteomes:UP000017929};
RA   Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J.,
RA   Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E.,
RA   Bonde I., Nielsen T., Manichanh C., Arumugam M., Batto J.,
RA   Santos M.B.Q.D., Blom N., Borruel N., Burgdorf K.S., Boumezbeur F.,
RA   Casellas F., Dore J., Guarner F., Hansen T., Hildebrand F., Kaas R.S.,
RA   Kennedy S., Kristiansen K., Kultima J.R., Leonard P., Levenez F.,
RA   Lund O., Moumen B., Le Paslier D., Pons N., Pedersen O., Prifti E.,
RA   Qin J., Raes J., Tap J., Tims S., Ussery D.W., Yamada T.,
RA   MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P., Wang J.,
RA   Brunak S., Ehrlich S.D.;
RT   "Dependencies among metagenomic species, viruses, plasmids and units
RT   of genetic variation.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC       {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00820389}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077,
CC       ECO:0000256|SAAS:SAAS00820399}.
CC   -!- SIMILARITY: Belongs to the RimP family. {ECO:0000256|HAMAP-
CC       Rule:MF_01077, ECO:0000256|SAAS:SAAS00820397}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:CDD37870.1}.
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DR   EMBL; CBGZ010000011; CDD37870.1; -; Genomic_DNA.
DR   Proteomes; UP000017929; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   CDD; cd01734; YlxS_C; 1.
DR   Gene3D; 3.30.300.70; -; 1.
DR   HAMAP; MF_01077; RimP; 1.
DR   InterPro; IPR003728; Ribosome_maturation_RimP.
DR   InterPro; IPR028998; RimP_C.
DR   InterPro; IPR036847; RimP_C_sf.
DR   InterPro; IPR028989; RimP_N.
DR   InterPro; IPR035956; RimP_N_sf.
DR   PANTHER; PTHR33867; PTHR33867; 1.
DR   Pfam; PF02576; DUF150; 1.
DR   Pfam; PF17384; DUF150_C; 1.
DR   SUPFAM; SSF74942; SSF74942; 1.
DR   SUPFAM; SSF75420; SSF75420; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000017929};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077,
KW   ECO:0000256|SAAS:SAAS00820400};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017929};
KW   Ribosome biogenesis {ECO:0000256|HAMAP-Rule:MF_01077,
KW   ECO:0000256|SAAS:SAAS00820393}.
FT   DOMAIN       17     85       DUF150. {ECO:0000259|Pfam:PF02576}.
FT   DOMAIN       89    155       DUF150_C. {ECO:0000259|Pfam:PF17384}.
SQ   SEQUENCE   155 AA;  17892 MW;  FA62F89FC70A44C0 CRC64;
     MARREEYESK VETWLLPLLE KNQFELVDVE YVREAGIWYL RAYIDKEGGI TVDDCEVVSR
     ELGDWLDQKD FIEDSYILEV SSPGLGRPLK KEKDFARSLG KDVEVRLYRP INKQKEFTGT
     LKAYDADTVT LSMEDGNDLA LAKSDIALIR LAFDF
//
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