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Database: UniProt
Entry: R6ZRB5_9BACE
LinkDB: R6ZRB5_9BACE
Original site: R6ZRB5_9BACE 
ID   R6ZRB5_9BACE            Unreviewed;       286 AA.
AC   R6ZRB5;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDD51028.1};
GN   ORFNames=BN800_02323 {ECO:0000313|EMBL:CDD51028.1};
OS   Bacteroides sp. CAG:875.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=1262752 {ECO:0000313|EMBL:CDD51028.1, ECO:0000313|Proteomes:UP000018287};
RN   [1] {ECO:0000313|EMBL:CDD51028.1, ECO:0000313|Proteomes:UP000018287}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MGS:875 {ECO:0000313|Proteomes:UP000018287};
RA   Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA   Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA   Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA   Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA   Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA   Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA   Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA   Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA   Wang J., Brunak S., Ehrlich S.D.;
RT   "Dependencies among metagenomic species, viruses, plasmids and units of
RT   genetic variation.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CDD51028.1}.
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DR   EMBL; CBHD010000160; CDD51028.1; -; Genomic_DNA.
DR   AlphaFoldDB; R6ZRB5; -.
DR   Proteomes; UP000018287; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR   PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC; 1.
DR   Pfam; PF00140; Sigma70_r1_2; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          17..49
FT                   /note="RNA polymerase sigma-70 region 1.2"
FT                   /evidence="ECO:0000259|Pfam:PF00140"
FT   DOMAIN          55..123
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          135..202
FT                   /note="RNA polymerase sigma-70 region 3"
FT                   /evidence="ECO:0000259|Pfam:PF04539"
FT   DOMAIN          222..274
FT                   /note="RNA polymerase sigma-70 region 4"
FT                   /evidence="ECO:0000259|Pfam:PF04545"
SQ   SEQUENCE   286 AA;  32791 MW;  0702760E8125AF6F CRC64;
     MRQLKITKSI TNRESASLDK YLQEIGREDL ITVEEEVELA QRIRKGDRAA LEKLTRANLR
     FVVSVAKQYQ NQGLSLPDLI NEGNLGLIKA AEKFDETRGF KFISYAVWWI RQSILQALAE
     QSRIVRLPLN QVGSLNKISK AFSKFEQENE RRPSPEELAD ELEIPVDKIS DTLKVSGRHI
     SVDAPFVEGE DNSLLDVLVN DDSPMADRSL VNESLSREID RALSTLTERE KDIIQMFFGI
     NTQEMTLEEI GDKFGLTRER VRQIKEKAIR RLRQNSRSKL LKSYLG
//
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