ID R7H094_9FIRM Unreviewed; 199 AA.
AC R7H094;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=RNAse M5 {ECO:0000313|EMBL:CDE33104.1};
GN ORFNames=BN645_01900 {ECO:0000313|EMBL:CDE33104.1};
OS Ruminococcus sp. CAG:403.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Ruminococcus.
OX NCBI_TaxID=1262958 {ECO:0000313|EMBL:CDE33104.1, ECO:0000313|Proteomes:UP000017925};
RN [1] {ECO:0000313|EMBL:CDE33104.1, ECO:0000313|Proteomes:UP000017925}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:403 {ECO:0000313|Proteomes:UP000017925};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDE33104.1}.
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DR EMBL; CBIS010000158; CDE33104.1; -; Genomic_DNA.
DR AlphaFoldDB; R7H094; -.
DR STRING; 1262958.BN645_01900; -.
DR Proteomes; UP000017925; Unassembled WGS sequence.
DR Gene3D; 3.40.1360.10; -; 1.
DR InterPro; IPR025156; RNase_M5_C.
DR InterPro; IPR006171; TOPRIM_domain.
DR PANTHER; PTHR39156:SF2; DNA PRIMASE (BACTERIAL TYPE) AND SMALL PRIMASE-LIKE PROTEINS; 1.
DR PANTHER; PTHR39156; RIBONUCLEASE M5; 1.
DR Pfam; PF13331; DUF4093; 1.
DR Pfam; PF01751; Toprim; 1.
DR SMART; SM00493; TOPRIM; 1.
DR SUPFAM; SSF110455; Toprim domain; 1.
DR PROSITE; PS50880; TOPRIM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000017925}.
FT DOMAIN 5..89
FT /note="Toprim"
FT /evidence="ECO:0000259|PROSITE:PS50880"
SQ SEQUENCE 199 AA; 21889 MW; 6E5A93C106A05E5F CRC64;
MISIKQAIVV EGKYDKIKLS SVVDAVILVT NGFRIYKNPE QLNLIRYYAK TTGVILLTDS
DRAGFQIRNY LKGAISEGTV YHVYIPDIYG KERRKVKPSA EGKLGVEGIN PKTLLAAFEK
AGVTAQQAPS EKKDPITNLD LYQLGLSGGA GSKQLRKQLQ KQLNLPDLLS TASLLDVLNT
MLSKEELAQL VDQLEAPTQ
//
