ID R7HAH2_9FIRM Unreviewed; 196 AA.
AC R7HAH2;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=Transcription repressor NadR {ECO:0008006|Google:ProtNLM};
GN ORFNames=BN634_01153 {ECO:0000313|EMBL:CDE36679.1};
OS Eubacterium sp. CAG:38.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae;
OC Eubacterium.
OX NCBI_TaxID=1262889 {ECO:0000313|EMBL:CDE36679.1, ECO:0000313|Proteomes:UP000017954};
RN [1] {ECO:0000313|EMBL:CDE36679.1, ECO:0000313|Proteomes:UP000017954}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:38 {ECO:0000313|Proteomes:UP000017954};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDE36679.1}.
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DR EMBL; CBIU010000073; CDE36679.1; -; Genomic_DNA.
DR AlphaFoldDB; R7HAH2; -.
DR STRING; 1262889.BN634_01153; -.
DR Proteomes; UP000017954; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0036094; F:small molecule binding; IEA:InterPro.
DR Gene3D; 3.30.1340.20; 3H domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR035922; 3H_dom_sf.
DR InterPro; IPR004173; 3H_domain.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR026043; NadR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR40068; TRANSCRIPTION REPRESSOR NIAR-RELATED; 1.
DR PANTHER; PTHR40068:SF1; TRANSCRIPTION REPRESSOR NIAR-RELATED; 1.
DR Pfam; PF02829; 3H; 1.
DR Pfam; PF08279; HTH_11; 1.
DR PIRSF; PIRSF037847; NiaR; 1.
DR SUPFAM; SSF75500; Putative transcriptional regulator TM1602, C-terminal domain; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PIRSR:PIRSR037847-1};
KW Nickel {ECO:0000256|PIRSR:PIRSR037847-1};
KW Reference proteome {ECO:0000313|Proteomes:UP000017954}.
FT DOMAIN 34..86
FT /note="Helix-turn-helix type 11"
FT /evidence="ECO:0000259|Pfam:PF08279"
FT DOMAIN 98..194
FT /note="3H"
FT /evidence="ECO:0000259|Pfam:PF02829"
FT BINDING 102
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /evidence="ECO:0000256|PIRSR:PIRSR037847-1"
FT BINDING 110
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /evidence="ECO:0000256|PIRSR:PIRSR037847-1"
FT BINDING 169
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /evidence="ECO:0000256|PIRSR:PIRSR037847-1"
FT BINDING 171
FT /ligand="Ni(2+)"
FT /ligand_id="ChEBI:CHEBI:49786"
FT /evidence="ECO:0000256|PIRSR:PIRSR037847-1"
SQ SEQUENCE 196 AA; 21836 MW; 9C2C463502AE48E7 CRC64;
MVFCFLARTE NLTSGEKLQR NVCGMGIIMN GEERREKLVE LLKNTESPLS GTRLSRLLHV
SRQVIVNDIA LLRAANVDIL STNRGYLLSV PVSSTRIFKV CHATEDFERE MQTIIDAGGK
IQDIIIEHPV YGRISAPLEI YSRNDIVKFK EKMQSGNAVP LCDITSGVHY HTILAYSDEI
LDDVAAALKS NGFLLS
//
