ID R7K430_9FIRM Unreviewed; 561 AA.
AC R7K430;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Stage V sporulation protein D {ECO:0000313|EMBL:CDE71060.1};
GN ORFNames=BN603_00542 {ECO:0000313|EMBL:CDE71060.1};
OS Subdoligranulum sp. CAG:314.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Subdoligranulum.
OX NCBI_TaxID=1262970 {ECO:0000313|EMBL:CDE71060.1, ECO:0000313|Proteomes:UP000017993};
RN [1] {ECO:0000313|EMBL:CDE71060.1, ECO:0000313|Proteomes:UP000017993}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:314 {ECO:0000313|Proteomes:UP000017993};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDE71060.1}.
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DR EMBL; CBJL010000025; CDE71060.1; -; Genomic_DNA.
DR AlphaFoldDB; R7K430; -.
DR STRING; 1262970.BN603_00542; -.
DR Proteomes; UP000017993; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.30.450.330; -; 1.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF19; STAGE V SPORULATION PROTEIN D; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000017993}.
FT DOMAIN 41..185
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 231..549
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 561 AA; 61174 MW; BBC823471ADB7BD7 CRC64;
MFVAIAFIFF VIFLRLGYIQ IVWGKKLQTR ALEQWTRDLP VTADRGDITD TNGIVFASSG
TSYTVYVRPN SVSNHSLVAE LLSQALKLSY QDVYDKVTAK ISENTIKRKI TVEEANLIRS
YNLEGVYLAA DTSREYVYGD FLSQVLGFVS SDNTGQSGLE AYYDKYLRGV DGAILTPSDL
VGKELEGESA YYTPPVSGLN VVTTIDFRIQ RVVENVLDLV MQGHSPKGAR CIVVNPQTGE
VLAMSSKPSV DLNNLPRDNI GELMASTKNM LITDVYEPGS TFKVLTAAAM LEEYARGNPK
AHSASYVFPN NANFRIVDGS RVKCWTTHTS SKHCNQNLGD ALNNSCNPIF TDIGLSLGKE
TMYKYLSAFG YGAVSGIDFA GEQAGLLVAE SAVTNGDLAR ISFGQTIAVT PLQLAMATSA
AVNGGLLMQP YLVKEIRTQE GELVKKFYPT VRQRAISEKV SRELAGLLEN VVTNGSGKQA
YIEGFKVGGK TGTAQKYENG HIAVGKYVSS FVGFFPADNP QYLALMLVDE PTGAHYGSTV
AAPYAKMIFQ QIINYKNLKP A
//
