ID R7L958_9BACT Unreviewed; 519 AA.
AC R7L958;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Transcriptional regulator NifA subfamily Fis Family {ECO:0000313|EMBL:CDE83727.1};
GN ORFNames=BN601_01074 {ECO:0000313|EMBL:CDE83727.1};
OS Coraliomargarita sp. CAG:312.
OC Bacteria; Verrucomicrobiota; Opitutae; Puniceicoccales;
OC Coraliomargaritaceae; Coraliomargarita.
OX NCBI_TaxID=1262865 {ECO:0000313|EMBL:CDE83727.1, ECO:0000313|Proteomes:UP000017918};
RN [1] {ECO:0000313|EMBL:CDE83727.1, ECO:0000313|Proteomes:UP000017918}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:312 {ECO:0000313|Proteomes:UP000017918};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDE83727.1}.
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DR EMBL; CBJS010000085; CDE83727.1; -; Genomic_DNA.
DR AlphaFoldDB; R7L958; -.
DR STRING; 1262865.BN601_01074; -.
DR Proteomes; UP000017918; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF95; TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000017918};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 207..430
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 519 AA; 57315 MW; E2AE5A7B38089FF3 CRC64;
MAEFKNKVKK NSASPKGKGL VVSVLHEISK AAVRTKDVAA LLSEVLDILH VQMNLTRGTV
TLRNGDLLVI RASHGLSDEE RKRGVYRIGE GVTGDVAARG VSRIVEDISK SKDFLNRTGS
RSLNSKTAFL CVPIIFNSNV IGTLSIDRIN PDAYTLRRDL RLLETIANII ADSVSVLFLE
MEENEKLNME NRRLRDRIES ELRPENAIGS GAAMMNVYEL VAAAGKSSAH VLVRGEVGTG
KDFIVRAIAN SPMWHDKPLE ILDCSAMSDA LIDETLFGSE RKKSLTALVK KAENGIVYLD
SMGLIGPALQ VKLLHFLETS EYKSQWGEKV FKSSARIIAS TSGDLETRIR SGIMRPDLYY
RLSTFTISIP PLRQRKRDIA QLAKFFLEKH SNLRGKKIAA ISHSAMNMLT SYKWPGNVRE
LENCIERAVI IAASDTITDS DLPPSLQTPQ STSAHKLKNL NNIDFTRAVE DFEREIIIEA
LAASGGNAAA AARQINVTRR ILNYKISKLG ITPKSFKGQ
//
