ID R7P4G0_9CLOT Unreviewed; 397 AA.
AC R7P4G0;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Peptidoglycan-binding LysM {ECO:0000313|EMBL:CDF19921.1};
GN ORFNames=BN733_00108 {ECO:0000313|EMBL:CDF19921.1};
OS Clostridium sp. CAG:609.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262827 {ECO:0000313|EMBL:CDF19921.1, ECO:0000313|Proteomes:UP000018389};
RN [1] {ECO:0000313|EMBL:CDF19921.1, ECO:0000313|Proteomes:UP000018389}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:609 {ECO:0000313|Proteomes:UP000018389};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDF19921.1}.
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DR EMBL; CBKL010000003; CDF19921.1; -; Genomic_DNA.
DR AlphaFoldDB; R7P4G0; -.
DR STRING; 1262827.BN733_00108; -.
DR Proteomes; UP000018389; Unassembled WGS sequence.
DR GO; GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:InterPro.
DR GO; GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
DR CDD; cd00118; LysM; 4.
DR CDD; cd02696; MurNAc-LAA; 1.
DR Gene3D; 3.10.350.10; LysM domain; 4.
DR Gene3D; 3.40.630.40; Zn-dependent exopeptidases; 1.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR002508; MurNAc-LAA_cat.
DR PANTHER; PTHR33734:SF35; LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1; 1.
DR PANTHER; PTHR33734; LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2; 1.
DR Pfam; PF01520; Amidase_3; 1.
DR Pfam; PF01476; LysM; 4.
DR SMART; SM00646; Ami_3; 1.
DR SMART; SM00257; LysM; 4.
DR SUPFAM; SSF54106; LysM domain; 4.
DR SUPFAM; SSF53187; Zn-dependent exopeptidases; 1.
DR PROSITE; PS51782; LYSM; 4.
PE 4: Predicted;
FT DOMAIN 197..240
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 250..293
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 301..344
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 353..396
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
SQ SEQUENCE 397 AA; 43684 MW; 8AA07D68916A5368 CRC64;
MDERTIKKVV IDAGHGGDDP GTIANGITEK DYTLKISNYI HNRLDEMGVP NEMSRTSDVM
LSASDRPKKI QSFYGNGSDV LVVSNHINAG GGDGAEIIYA LRNNDKFAKK LATEFENAGQ
SVRKYYQRRL PSNPAKDYYY IMRDTPNNET VIVEYGFADT ISDANLIKND WEKLAEAVTK
AIVEYAGGKY VAPLDSNYYT VKSGDSLWSI SRKFGVSVNE LKKVNNLSSN LLSIGQNLII
PGKKNNTSSN EYVVKKGDTL YGIANKYNVS VDNLKSYNNL STDSLSIGQI IKIPDNKVNS
NEYVVKSGDN LYSISRKYGV SVDELMSVNN LKSTVLSVGQ VLKIPNSGEV TNVIYTVKKG
DNLWSIAKNN KTTVDAIVKL NNLSNANLSI GQKLLLP
//
