ID R7Q6E5_CHOCR Unreviewed; 273 AA.
AC R7Q6E5;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=PBS-linker domain-containing protein {ECO:0000259|PROSITE:PS51445};
GN ORFNames=CHC_T00001788001 {ECO:0000313|EMBL:CDF32956.1};
OS Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales;
OC Gigartinaceae; Chondrus.
OX NCBI_TaxID=2769 {ECO:0000313|EMBL:CDF32956.1, ECO:0000313|Proteomes:UP000012073};
RN [1] {ECO:0000313|Proteomes:UP000012073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Stackhouse {ECO:0000313|Proteomes:UP000012073};
RX PubMed=23503846; DOI=10.1073/pnas.1221259110;
RA Collen J., Porcel B., Carre W., Ball S.G., Chaparro C., Tonon T.,
RA Barbeyron T., Michel G., Noel B., Valentin K., Elias M., Artiguenave F.,
RA Arun A., Aury J.M., Barbosa-Neto J.F., Bothwell J.H., Bouget F.Y.,
RA Brillet L., Cabello-Hurtado F., Capella-Gutierrez S., Charrier B.,
RA Cladiere L., Cock J.M., Coelho S.M., Colleoni C., Czjzek M., Da Silva C.,
RA Delage L., Denoeud F., Deschamps P., Dittami S.M., Gabaldon T.,
RA Gachon C.M., Groisillier A., Herve C., Jabbari K., Katinka M., Kloareg B.,
RA Kowalczyk N., Labadie K., Leblanc C., Lopez P.J., McLachlan D.H.,
RA Meslet-Cladiere L., Moustafa A., Nehr Z., Nyvall Collen P., Panaud O.,
RA Partensky F., Poulain J., Rensing S.A., Rousvoal S., Samson G.,
RA Symeonidi A., Weissenbach J., Zambounis A., Wincker P., Boyen C.;
RT "Genome structure and metabolic features in the red seaweed Chondrus
RT crispus shed light on evolution of the Archaeplastida.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:5247-5252(2013).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000256|ARBA:ARBA00004185}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004185}; Stromal side
CC {ECO:0000256|ARBA:ARBA00004185}.
CC -!- SIMILARITY: Belongs to the phycobilisome linker protein family.
CC {ECO:0000256|PROSITE-ProRule:PRU00775}.
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DR EMBL; HG001623; CDF32956.1; -; Genomic_DNA.
DR RefSeq; XP_005712759.1; XM_005712702.1.
DR AlphaFoldDB; R7Q6E5; -.
DR STRING; 2769.R7Q6E5; -.
DR EnsemblPlants; CDF32956; CDF32956; CHC_T00001788001.
DR GeneID; 17320474; -.
DR Gramene; CDF32956; CDF32956; CHC_T00001788001.
DR KEGG; ccp:CHC_T00001788001; -.
DR OrthoDB; 5608013at2759; -.
DR PhylomeDB; R7Q6E5; -.
DR Proteomes; UP000012073; Unassembled WGS sequence.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030089; C:phycobilisome; IEA:UniProtKB-UniRule.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3130.20; Phycobilisome linker domain; 1.
DR InterPro; IPR001297; PBS_linker_dom.
DR InterPro; IPR038255; PBS_linker_sf.
DR PANTHER; PTHR34011:SF5; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2; 1.
DR PANTHER; PTHR34011; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATED; 1.
DR Pfam; PF00427; PBS_linker_poly; 1.
DR PROSITE; PS51445; PBS_LINKER; 1.
PE 3: Inferred from homology;
KW Antenna complex {ECO:0000256|ARBA:ARBA00022549};
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW Phycobilisome {ECO:0000256|ARBA:ARBA00022738, ECO:0000256|PROSITE-
KW ProRule:PRU00775}; Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000012073};
KW Thylakoid {ECO:0000256|ARBA:ARBA00023078}.
FT DOMAIN 1..171
FT /note="PBS-linker"
FT /evidence="ECO:0000259|PROSITE:PS51445"
SQ SEQUENCE 273 AA; 30660 MW; CBDF3B7FF402E7E1 CRC64;
MAFSSIDMPE CAGSLADVAV STKAQVIHMC YKHVFGNAYL MESERDGLAV AESDFKLNNL
SVRELVRAMG KSEAYRKRFF ERSGPYRFVE LNCKHFLGRG PVSQEEVSFH VQKLINEGYD
AEIDSYVDCA EYERKFGMDF VPRFVFEGTY QRNDNFNRLA IMRKHWDGCS TSTVSGSTAP
GKPIPAQLCM GHGGYVNGFI GVMKGLPAGF RPEPSRPPVP GPFPSNGQAG LKIRIKVAEN
LYQVYEMPSI TAKVEPAWKK ERAGEKRWNG VWF
//
