ID R7QC84_CHOCR Unreviewed; 376 AA.
AC R7QC84;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Phycobilisome 31.8kD linker polypeptide {ECO:0000313|EMBL:CDF35689.1};
GN ORFNames=CHC_T00009048001 {ECO:0000313|EMBL:CDF35689.1};
OS Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales;
OC Gigartinaceae; Chondrus.
OX NCBI_TaxID=2769 {ECO:0000313|EMBL:CDF35689.1, ECO:0000313|Proteomes:UP000012073};
RN [1] {ECO:0000313|Proteomes:UP000012073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Stackhouse {ECO:0000313|Proteomes:UP000012073};
RX PubMed=23503846; DOI=10.1073/pnas.1221259110;
RA Collen J., Porcel B., Carre W., Ball S.G., Chaparro C., Tonon T.,
RA Barbeyron T., Michel G., Noel B., Valentin K., Elias M., Artiguenave F.,
RA Arun A., Aury J.M., Barbosa-Neto J.F., Bothwell J.H., Bouget F.Y.,
RA Brillet L., Cabello-Hurtado F., Capella-Gutierrez S., Charrier B.,
RA Cladiere L., Cock J.M., Coelho S.M., Colleoni C., Czjzek M., Da Silva C.,
RA Delage L., Denoeud F., Deschamps P., Dittami S.M., Gabaldon T.,
RA Gachon C.M., Groisillier A., Herve C., Jabbari K., Katinka M., Kloareg B.,
RA Kowalczyk N., Labadie K., Leblanc C., Lopez P.J., McLachlan D.H.,
RA Meslet-Cladiere L., Moustafa A., Nehr Z., Nyvall Collen P., Panaud O.,
RA Partensky F., Poulain J., Rensing S.A., Rousvoal S., Samson G.,
RA Symeonidi A., Weissenbach J., Zambounis A., Wincker P., Boyen C.;
RT "Genome structure and metabolic features in the red seaweed Chondrus
RT crispus shed light on evolution of the Archaeplastida.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:5247-5252(2013).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000256|ARBA:ARBA00004185}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004185}; Stromal side
CC {ECO:0000256|ARBA:ARBA00004185}.
CC -!- SIMILARITY: Belongs to the phycobilisome linker protein family.
CC {ECO:0000256|PROSITE-ProRule:PRU00775}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; HG001741; CDF35689.1; -; Genomic_DNA.
DR RefSeq; XP_005715508.1; XM_005715451.1.
DR AlphaFoldDB; R7QC84; -.
DR STRING; 2769.R7QC84; -.
DR EnsemblPlants; CDF35689; CDF35689; CHC_T00009048001.
DR GeneID; 17323239; -.
DR Gramene; CDF35689; CDF35689; CHC_T00009048001.
DR KEGG; ccp:CHC_T00009048001; -.
DR OMA; EFTWSFQ; -.
DR OrthoDB; 989at2759; -.
DR PhylomeDB; R7QC84; -.
DR Proteomes; UP000012073; Unassembled WGS sequence.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030089; C:phycobilisome; IEA:UniProtKB-UniRule.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3130.20; Phycobilisome linker domain; 1.
DR InterPro; IPR008213; CpcD-like_dom.
DR InterPro; IPR001297; PBS_linker_dom.
DR InterPro; IPR038255; PBS_linker_sf.
DR PANTHER; PTHR34011:SF5; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2; 1.
DR PANTHER; PTHR34011; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATED; 1.
DR Pfam; PF01383; CpcD; 1.
DR Pfam; PF00427; PBS_linker_poly; 1.
DR SMART; SM01094; CpcD; 1.
DR PROSITE; PS51441; CPCD_LIKE; 1.
DR PROSITE; PS51445; PBS_LINKER; 1.
PE 3: Inferred from homology;
KW Antenna complex {ECO:0000256|ARBA:ARBA00022549};
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW Phycobilisome {ECO:0000256|ARBA:ARBA00022738, ECO:0000256|PROSITE-
KW ProRule:PRU00775}; Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000012073};
KW Thylakoid {ECO:0000256|ARBA:ARBA00023078}.
FT DOMAIN 44..229
FT /note="PBS-linker"
FT /evidence="ECO:0000259|PROSITE:PS51445"
FT DOMAIN 294..374
FT /note="CpcD-like"
FT /evidence="ECO:0000259|PROSITE:PS51441"
SQ SEQUENCE 376 AA; 41826 MW; 1F0CA79F5DAA0C2A CRC64;
MAFVPIVGLR PAAATRPFVT SFTGTALTAP AVTPSRFVAR LGTVAGNSSL DKLGLERFQK
ERYAVPDPTR PVGFSMDYEV IMQGTYRQIF GNAYIMESER AEMAKLESEF RDGRYTVKEF
CRVLAKTYQY RRRFFDSRPL YGAIELNFKH FLGRTPDGLE EYRRKSAVYD SEGYDAFIDA
FFDDDYEFDQ YYGEWTVPFY RGHLTSSNLS MCAFTHMFQV VRGASTSDKS NPCIMTNRIP
LNQAGIQSIP LAVIAPGSDG CTFQSPDASA GSWQGGFSGA TMARSYHGTR VSGGKMFRIE
VADYSQSGAT NGGAGVSLRS RSGKFYKTRN NSFNARRSDF RGTNKVYLVP FNELSKTYVS
IHKNGGKIAS ITPITG
//
